| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3834 |
|---|
| Symbol | |
|---|
| ID | 5704858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4365522 |
|---|
| End bp | 4366256 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641273256 |
|---|
| Product | 16S ribosomal RNA methyltransferase RsmE |
|---|
| Protein accession | YP_001538618 |
|---|
| Protein GI | 159039365 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00075899 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGCCC CGTTGTTCCT GGTCGAGTCG TTGCCCACCG CCGACACGGC GATCCTCGAA
GGGGCGGAGG GACACCACGC CGCCACCGTG CAGCGGCTGC GGGTGGGCGA GGAACTGCTG
CTCGCCGACG GCCGTGGTGG CACGGCGGCC GCTGTGGTCA CCGCCGTGGG TAAGGGTGTG
CTCGACGTCC GGATCACCTC CCGGGGCTAC ACGGACGCTC CCGCCCATCG GCTCGTCGTC
GTCCAGGGCC TCGCCAAGGG GGAGCGGGGT GAACTGGCCG TGCAGGCGAT GACCGAGGTC
GGGGTGGACG AGATCGTCCC GTGGACGGCC GCCCGTTCGG TCACGCAGTG GCGGGGCGAT
CGGGGGGTTC GTGCCCGGGA GAAGTGGGTC GCCACCGTGC GGGAGGCCAC CAAGCAGGCC
CGTCGAGCGT GGCTGCCGGT CGTGGCCGGC ACGCCGGACG AGGCCACCTC CCAGGTGGCC
GGCCGGATCG CCGGCGCCGC GGCCGCGTAC GTCCTGCATG AGCAGGCGGA GGAACGTCTG
GTCACCGCGG AGCTGCCCGA CGGTGGGGAG ATCGTGTTGG TGGTCGGCCC GGAGGGCGGC
GTCGCTCCGG CCGAGCTGAC CGCCTTCGTG GCGGCGGGTG CCCAGCCGGT GCGGCTGGGC
CCGTCGGTGT TGCGTACCTC GACCGCCGGG GTGGCGGCGC TGTCGGTGCT GGCCGCCCGC
CTCGGCCGCT GGTAA
|
|---|
| Protein sequence | MSAPLFLVES LPTADTAILE GAEGHHAATV QRLRVGEELL LADGRGGTAA AVVTAVGKGV
LDVRITSRGY TDAPAHRLVV VQGLAKGERG ELAVQAMTEV GVDEIVPWTA ARSVTQWRGD
RGVRAREKWV ATVREATKQA RRAWLPVVAG TPDEATSQVA GRIAGAAAAY VLHEQAEERL
VTAELPDGGE IVLVVGPEGG VAPAELTAFV AAGAQPVRLG PSVLRTSTAG VAALSVLAAR
LGRW
|
|---|
| |