Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3594 |
Symbol | |
ID | 5707584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 4149377 |
End bp | 4150138 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641273018 |
Product | hypothetical protein |
Protein accession | YP_001538383 |
Protein GI | 159039130 |
COG category | [R] General function prediction only |
COG ID | [COG0730] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.464515 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000119415 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCACATCA CCGACGCCGT GCTGCTCGTC GCCGCGGGGC TGGCCGCGGG CACTGTGAAC GCGGTAGCCG GCGGGGGCTC GCTGATCACC TTCCCGGCGT TGATCGCCAC CGGCCTGCCG CCGGTACCAG CGAACGTGAG TAACTCGGTG TCGGTCTTCC CGGGGTACGT GGCGAGCGTC GCGGGTAGCC GTGCGGACCT GCCGCGTGGT CGGGAGCTGT TGGCCCTTCT GCCCACCACC GTCCTCGGCA CGATCGCCGG TGCCGTACTC CTGCTGGCCA CTCCGGCGCG GGCGTTCGAG CTGGTCGTAC CGTTTCTGGT GCTCGGGGCG ACGGCGGTGC TGGCCCTTCA GGAGCCGCTG CGCAGGTTCG TCGGACACCC CCGCGACCGG TCGCCGCGCC ACCGCACCGT CGCGGTGCAG GCGATGGTCG CGCTCGGTGC GGTGTACGGC GGCTACTTCG GCGCGGCGCT CGGGGTGATG TTGGTGGCGG GCCTGGCACT GGTGCTGGAT GCGTCGCTGG TCCGGGTCAG CGCCATCAAG AACCTGCTCT CGGCGGTGGT CGGGCTCACC ACACTGGTGG TGTTTGCGCT GTTCGGGCCG GTCAACTGGG CGGCGGTCGC CCTGGTAGCA CCGGCGACAC TGGTCGGTGG GTACGTGGGC GCCCGGCTGG TACCTCGACT GCCGTCGACG GTACTCAGAA CGGTGATCGT GATGTTCGGG ACGGTCATCG GTCTGTACCT GCTGTGGCGG GCCACAGGCT GA
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Protein sequence | MHITDAVLLV AAGLAAGTVN AVAGGGSLIT FPALIATGLP PVPANVSNSV SVFPGYVASV AGSRADLPRG RELLALLPTT VLGTIAGAVL LLATPARAFE LVVPFLVLGA TAVLALQEPL RRFVGHPRDR SPRHRTVAVQ AMVALGAVYG GYFGAALGVM LVAGLALVLD ASLVRVSAIK NLLSAVVGLT TLVVFALFGP VNWAAVALVA PATLVGGYVG ARLVPRLPST VLRTVIVMFG TVIGLYLLWR ATG
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