| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3552 |
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| Symbol | |
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| ID | 5703933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 4097361 |
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| End bp | 4099133 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641272979 |
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| Product | 2-oxoglutarate dehydrogenase E2 component |
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| Protein accession | YP_001538345 |
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| Protein GI | 159039092 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component)
[TIGR02927] 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0994187 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.134474 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGTAT CGGTCACCAT GCCCCGGCTC GGTGAAAGCG TCACCGAGGG CACCGTCACG
CGCTGGCTCA AGCAGGAGGG CGACACCGTC GAGGTTGACG AGCCGCTGCT CGAGGTGTCG
ACCGACAAGG TGGACACCGA GATCCCGTCC CCCGCGGCCG GCGTGCTGAC CCGGATCGTG
GTCGGCGAGG ACGAGACCGC CGAGGTCGGC AGCGAGCTGG CGACGATCGG CGACGAGGCG
TCGAGTGGCG GCGGGGCCGC GCCACAGCAG CCGGCCACGT CGGCACCCGA GCCGACCGCC
GCCGCTGAGG GGAACGGCCC GGAGCCGGCG CAGCCCGCCG AGGAGCAGCC GGCTCCCGCG
CCGTCGGGCG AGGGTACCCC GGTGACGATG CCGGCCCTCG GCGAGAGCGT TACCGAGGGC
ACGGTCACCC GCTGGCTCAA GCAGGTCGGC GAGACCGTGG AGGTCGACGA GCCGCTGCTC
GAGGTGTCGA CCGACAAGGT GGACACCGAG ATCCCGTCGC CGGTCGCTGG GACCGTCCTG
GAAATCACCG TCGCGGAGGA CGAGACGGCG GACGTCGGCG CGACGCTGGC GGTCGTCGGC
GCGGCCGGTG CCACGCCGAA GGCCGAGCCG AAGCCTGAGC CGAAGGCGGC GGCCCCCGCA
CCGAAGCCCG AGCCGGAGGT CACCGAGCCG ACCCCGGGGG TGTCCTACAA CGAGCCGGCG
GCGGAGACCG AGGTCGCCGC CGAACCGGCG AAGGCCGAGC AGGCCGCCGC CCCGTCCGCG
CCCGCCCCGC AGCCGTCGGG AACCGGCGGT GCGGAAACCC CGGGATACGT CACCCCGCTG
GTCCGCAAGC TGGCCGGTGA GCACGGGGTC GACCTGGCCA CGGTCAACGG CACCGGCGTC
GGTGGCCGGA TCCGGAAGCA GGACGTCCTC GACGCCGCCG AGCAGGCCCG CGCGGCCAAG
GCGGCTCCGG CCCCGGCTGC GGAGCCCACC CCGGCGGCGC AGCCCGCCCC GGCGGCGCCG
AAGCCGGCTG CCCGGCCCGC GCCCAGCAGC AAGCGGGGCG CCACCGAGAA GCTGCCCCGG
ATCCGCGCGA CCATCGCGAA GCGGATGCAC GAGTCGCTGC ACGAGATGGC GCAGCTCACC
ACCGTGGTCG AGGTCGACGT CACCCGGATC GCCAAGCTGC GGGCCCAGGC GAAGGACTCG
TTCCAGCAGC GGCACGGCGT GAAGCTGTCC TTCCTGCCGT TCTTCGCTCT GGCCGCCGTC
GAGGCGTTGC AGGCGTACCC GATCGTCAAC GCCCAGATGG ACCTGGCGGC CGGGACGATC
ACCTACCCAG AGGCGGAGCA CCTCGGCATC GCCGTGGACA CCGAGCGGGG CCTGATGGTG
CCGGTCATTC ACAACGCCGG CGACCTCAAC CTCGGTGGCA TCGCCAAGCG GGTCTCCGAC
CTGGCCGAGC GCACCCGTAC CAACAAGATC AGCCCGGATG AGCTCGCTGG TGCGACGTTC
ACGCTGACCA ACACCGGCAG CCGGGGCGCC CTCTTCGACA CCCCGATCGT GCCGTCGCCG
CAGTCGGCGA TGCTCGGCAC GGGTGCCGTG GTCAAGCGCC CGGTCGTGGT CAACGACCCG
GAACTGGGCG AGGTCGTGGC CGTCCGGTCA ATGATCTACC TGGCCCTGTC GTACGACCAC
CGACTGATCG ACGGTGCCGA CGCGGCCCGT TTCCTTGGCG CGATCAAGGA ACGGCTGGAG
GCCGGCAACT TCGAGGCCGA ACTGGGCCGG TAG
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| Protein sequence | MPVSVTMPRL GESVTEGTVT RWLKQEGDTV EVDEPLLEVS TDKVDTEIPS PAAGVLTRIV
VGEDETAEVG SELATIGDEA SSGGGAAPQQ PATSAPEPTA AAEGNGPEPA QPAEEQPAPA
PSGEGTPVTM PALGESVTEG TVTRWLKQVG ETVEVDEPLL EVSTDKVDTE IPSPVAGTVL
EITVAEDETA DVGATLAVVG AAGATPKAEP KPEPKAAAPA PKPEPEVTEP TPGVSYNEPA
AETEVAAEPA KAEQAAAPSA PAPQPSGTGG AETPGYVTPL VRKLAGEHGV DLATVNGTGV
GGRIRKQDVL DAAEQARAAK AAPAPAAEPT PAAQPAPAAP KPAARPAPSS KRGATEKLPR
IRATIAKRMH ESLHEMAQLT TVVEVDVTRI AKLRAQAKDS FQQRHGVKLS FLPFFALAAV
EALQAYPIVN AQMDLAAGTI TYPEAEHLGI AVDTERGLMV PVIHNAGDLN LGGIAKRVSD
LAERTRTNKI SPDELAGATF TLTNTGSRGA LFDTPIVPSP QSAMLGTGAV VKRPVVVNDP
ELGEVVAVRS MIYLALSYDH RLIDGADAAR FLGAIKERLE AGNFEAELGR
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