Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3528 |
Symbol | |
ID | 5704596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 4069814 |
End bp | 4070782 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641272955 |
Product | hypothetical protein |
Protein accession | YP_001538321 |
Protein GI | 159039068 |
COG category | [S] Function unknown |
COG ID | [COG3336] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000675219 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCAGCGCG TCGATCCAAT CTCCATTGCG ACCTCGGTCG CCACCCCAGC CGCGACCTCG ATCTCCGCGC CGGCGGCAGC CGCGACCACC CCACCACCAT TCACCGTCAC CTCGGTGTTC ACCGAGGCGC AGCTGGACAG CTGGGTCACC GTCGGCCTGG TGCTCGCGGC CGGACTCTAC CTCTACGGCA TACACCGGCT CCGGGTGAGT GGCACCCGGT GGCCCGTCGC CCGGGCGGCC CTCTTCCTCG GCCCGGGCCT CGGCGGCATC GCCTCGGTGA CGGTCAGCGG GCTCCAGGCG TACGACTCGA CACTGCTGTC GGTAGACATG GTCCAGCACC TGATGCTGTC CATGGTGGCA CCGATCTTCC TGGCCCTGGG CGCACCGATC ACGCTGGCGC TGCAGGCCCT GCCGCCAGGC CCTCGCGAAC GCTTGCTGGC GATGGTGCAC AGCCGGCTCG CCCGGGCCTG CAGCCACCCC CTGGTCGCCT TCGCGATCTT CGTGGTCACC CCGTTCGCCA TCTACTTCAC CGACCTGTAC CGCTACACGC TCGAACACGC CTGGGCGCAC GGGTTGGTCC ACGCGCACGT CATCCTGGCC GGCTGCGTCT TCTTCTGGCC GCTGCTCGGG GTCGACCCAC TGCCCGGCCG CTGGCCCCAC CCGGGCCGGG CCCTGCTGAT GCTGCTCTCC GTGCCCCTCT ACACCGTGCT CGGGCTCTCC ATCATGCAGT CGAGCACACT CTTCGGCGGC GACTGGCACC CGTCACTCGG CCTCACCTGG GCCGACCCGT GGGAGGATCA GGTGATCGCC GGCGGGATCC TGTGGGGCGG CGGGGAGTTC GTCAGCGTCA CCGTACTGGC CGTACTGGTC GGGCAGTGGA TGCGCCAGGC CGAACGGGAA GCCCGTCGGA TCGACCGCGA GTTGGACCGT CAGGAGGCCC ACCAGCGGGC TACCGAGGCG ACCGGTTGA
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Protein sequence | MQRVDPISIA TSVATPAATS ISAPAAAATT PPPFTVTSVF TEAQLDSWVT VGLVLAAGLY LYGIHRLRVS GTRWPVARAA LFLGPGLGGI ASVTVSGLQA YDSTLLSVDM VQHLMLSMVA PIFLALGAPI TLALQALPPG PRERLLAMVH SRLARACSHP LVAFAIFVVT PFAIYFTDLY RYTLEHAWAH GLVHAHVILA GCVFFWPLLG VDPLPGRWPH PGRALLMLLS VPLYTVLGLS IMQSSTLFGG DWHPSLGLTW ADPWEDQVIA GGILWGGGEF VSVTVLAVLV GQWMRQAERE ARRIDRELDR QEAHQRATEA TG
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