Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3511 |
Symbol | |
ID | 5703320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 4050807 |
End bp | 4051472 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641272938 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001538304 |
Protein GI | 159039051 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0444635 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACAC CGACACCGGC AGCTCGTACC AAGGTCCTCC TTGTTGACGA TCATGACCTG ATCCGCAAGG GGCTTCGACA CGCCTTCGAG CGCGACCGGC AGTTCGAGGT CGTCGGCGAG GCCGCCACCG CGGCCGAGGG CGTTCGCCAG GCCGGCGCCC TGCAACCGGA CGTGGTCATT ATGGACCTGC GGCTACCCGA CGGCAGCGGC CTGGAGGCCA CCCGCGCGCT GCGCAAGTCC AGCGCCACGA TGGGCATCGT CGTGCTGACC ATGTACGCGG GCGACGACCA GCTCTTCGGC GCGCTCGAGG CTGGCGCGAG CGCCTTTGTT CCGAAGACCG CCCCGGCGGA CGAGGTCGTC GCTGCGGCCC GGCACGCCGC CTCCTCACCC AGCGCGTTCA CCGCCGCCGA CCTGGCTGAG GCGATGAAGC GCCGGCTGGC CCCATCCGGG CCGCAGCTCT CCCCACGCGA GGGGCAGGTG CTGCGCCTCC TCGCCGACGG GATGAGCGTG GCCGGCATCG CCAAGCAACT CTTCGTCAGC GAGTCCACTG CCAAGACGCA CATTTCCAAA CTGTACGAAA AGCTTGGCGC CGCCAACCGC GCCCAGGCGT TGATGACAGC GCTGCGGCTC GGCCTGCTCG AAGCACCAGA CGCGCCGAAA TTCTGA
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Protein sequence | MTTPTPAART KVLLVDDHDL IRKGLRHAFE RDRQFEVVGE AATAAEGVRQ AGALQPDVVI MDLRLPDGSG LEATRALRKS SATMGIVVLT MYAGDDQLFG ALEAGASAFV PKTAPADEVV AAARHAASSP SAFTAADLAE AMKRRLAPSG PQLSPREGQV LRLLADGMSV AGIAKQLFVS ESTAKTHISK LYEKLGAANR AQALMTALRL GLLEAPDAPK F
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