Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3460 |
Symbol | |
ID | 5708209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3990006 |
End bp | 3992474 |
Gene Length | 2469 bp |
Protein Length | 822 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641272887 |
Product | transglutaminase domain-containing protein |
Protein accession | YP_001538253 |
Protein GI | 159039000 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0458672 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCCA AGCGGAACCT GGGCCTGGTC GCCGCCGCCG CGACACTGCT CGCCGCGGCA CCGCTGTCGG CCATCTTCGA CCGCTGGACG TGGCTGGTCC AGTCGGCCAT CACCGTCGCG GTGGTGGCCG CGGTGGCCGC CCTGGCCCGG CTGGGACGGA TCCCGCTGTG GGGGCAGGTG CTGGCCATGC TCGGCGGCCT GGTGCTCGCC CTGACCTGGC TGTTTCCCTC CGGCGCCGAG CTGCTGGGCG TGGTGCCGAC CCCGTCCACC GTCGGGCATT TCGGGAGTCT GGCCGAGGCG TCGCTGGTGG ACATGCGCTC CTACGGAGTG AAGGTGCCGG ACACCGACCC GATGCTGTTC CTCGCTGTGC TCGGCGTCGG CGGGGTCGCC GTGCTGGTCG ACCTGGTGGC GGTCGAGTTA CGCAAGCCGG CGCTGGCAGG CCTGCCGATG CTGGCCATCT ACTCGGTCCC GGTGGCGGTC TACGTGGACA GCGTCCCCCC GGCGCCCTTC ATCATCGGCG CGGCCGGCTA CCTGTGGCTG CTGGTCGCCG ACAACGTCGA CTGCGTCCGC CGGTTCGGCC GACGCTTCAC CGGCGACGGC CGGGGCGTGG ACGTGTGGGC GGCGTCCCCG CTGTCCTCTG CTGGTCGACG GCTCGCGGCA GTGGGGGTCG TGGTCGCGGT CGTGCTGCCG CTGGCGGCGC CGGGGATGGC CGGCGGTCTG CTCGACACGA TCGGTTCGGG CACCGGGGAG GGCACGGGCG GATCGGGCCG GGCCACCAAC GGTCGGGTCG ACCTGTTCTC CGCGCTCACC GGTCAACTCA ACCAGAACGA GGTCACCGAC ATGGTGAAGG TGACCACCGA CGAGTCGTCC CCCTTCTACC TACGGTTCGG CGTCGCCGAC CAACTGCGTA CCGATGGCTT CCGGGCGCGG GCCCCCAGTG GCTCGTCGGC CAGCCGGGAG CTGCGCCCGG CCGAGCCGGA CCGGGAGGGG ATCGAACGCA CCCGTTACCG GGCGACGGTC GAGGTGATGG AGAGTTTCGA GATGCCGCTG CTTCCGGTGT ACGCCGAGCC GGTGCGGATC CAGGGCCTGA ACGGCAAGTG GTTCTACGAC ACGAACCAAC AGGTCCTGTT CTCCAACCGG GAGCGTTCGT CGGGCAAGCG CTACGAGTTC GAATACGTGC GGTCGACCTA CTCCCCGTCG GCGCTGCGGC AGGCCCGCCC ACTCCCGGCC GAACACAGCC TGCGTCGGCA GATGAGCACT CCGACGGTGC CGGCGGTGGA GGCGCTGGTT GACGAGCTGA CCCAGGGACG TGACACCGAG TACGACAAGG TGCGCGCCAT CTACGACCAT TTCGCCACCG AGAACGGGTT CAGCTATGCC CTCAGCACCG AGGGGGGCAC CAGTGGTCAG GAGATCGTCG ACTTCCTGAC CAACAAGGTC GGGTTCTGCC AGCAGTACGC CGCCGCGATG GCGTGGCTGG TCCGGGCGGC CGACATTCCG GCGCGGGTCG CCTTCGGGTT CACCAACGGT GCCAACGTCG ACGGCGACAC CTACGTGCTG ACCAACCGTA ACCTGCACGC CTGGACCGAG GTCTACTTCG ACGGGTTCGG CTGGGTGCCG TTCGACACCA CGCCCGCGTA CGGCGTGCAG GGCGCCGCCC GGACTGCCTG GGCCCCCGAC CTGGAAGCGG CGGAGGATGT CACACCGGAG CCGAACACGA CGGCGGGGCC AGCGGGGTCG GATCCCACGA CGAACCCCAA CCAGCTGGAA GAAGGGCTGG AGGACGAGCT GTCCGGGCTG CCGGGCGACA CCGGCACCCC CAACCGGCCC CTGCCGCTCT GGGTGTGGTG GGCCGCCGGG GCACTGATCC TGCTCGTGCT GCTCGCCGTC CCGGCGCTGC GACGATCCCT CCTGCGCCGG CGGCGTAGCG GCCGACGAGC GCCAGCAGCG GCGCCTGCCG GGACAGCCAC GGCGAACGCC GTCGCGGCGT CTCCCGACGG GCGCCACATG GTGGTACTGG CCGACGCGGA CCGGGCACGG GCCGATGCGC ACGCGGCCTG GGACGAACTG CTGGACACGT TGGTGGACTT CCGGCTGCGG ATCGACCGGA CGGAGACCCC CCGCGCCACC GTCGGTCGGC TCACGAGGGA AGCGTTCCGC GAGGACACCG AGGCCGCCTC GGCGGTACAG CTGCTGGGTC GAGCCGAGGA GCTCGCCCGG TACGCGCGGG ATCCGCACTC CGGCGAGCCG CTGCCGCCGG CCCTGCGCCG GGTCCGCGCG GCCCTCGCGG CAGGGGCAAG CCGCCGCACA CGCCTCATGG CAGCGGCCCT GCCCCCATCA GTACTGCTGC GGTGGCGAAC CGCCGTGGCG GAAACCTCGG CCCGCCTGGT GGCGTCCTAC GGCCGCCTCC AGTCCGTGGC CCTGCGCTGG AGCCCGCGTC GGCTGCTCAC CAACCGCCTT CCCCGTTGA
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Protein sequence | MIAKRNLGLV AAAATLLAAA PLSAIFDRWT WLVQSAITVA VVAAVAALAR LGRIPLWGQV LAMLGGLVLA LTWLFPSGAE LLGVVPTPST VGHFGSLAEA SLVDMRSYGV KVPDTDPMLF LAVLGVGGVA VLVDLVAVEL RKPALAGLPM LAIYSVPVAV YVDSVPPAPF IIGAAGYLWL LVADNVDCVR RFGRRFTGDG RGVDVWAASP LSSAGRRLAA VGVVVAVVLP LAAPGMAGGL LDTIGSGTGE GTGGSGRATN GRVDLFSALT GQLNQNEVTD MVKVTTDESS PFYLRFGVAD QLRTDGFRAR APSGSSASRE LRPAEPDREG IERTRYRATV EVMESFEMPL LPVYAEPVRI QGLNGKWFYD TNQQVLFSNR ERSSGKRYEF EYVRSTYSPS ALRQARPLPA EHSLRRQMST PTVPAVEALV DELTQGRDTE YDKVRAIYDH FATENGFSYA LSTEGGTSGQ EIVDFLTNKV GFCQQYAAAM AWLVRAADIP ARVAFGFTNG ANVDGDTYVL TNRNLHAWTE VYFDGFGWVP FDTTPAYGVQ GAARTAWAPD LEAAEDVTPE PNTTAGPAGS DPTTNPNQLE EGLEDELSGL PGDTGTPNRP LPLWVWWAAG ALILLVLLAV PALRRSLLRR RRSGRRAPAA APAGTATANA VAASPDGRHM VVLADADRAR ADAHAAWDEL LDTLVDFRLR IDRTETPRAT VGRLTREAFR EDTEAASAVQ LLGRAEELAR YARDPHSGEP LPPALRRVRA ALAAGASRRT RLMAAALPPS VLLRWRTAVA ETSARLVASY GRLQSVALRW SPRRLLTNRL PR
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