| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3442 |
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| Symbol | |
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| ID | 5703292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 3968004 |
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| End bp | 3969428 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641272869 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001538235 |
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| Protein GI | 159038982 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.746586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0571528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCAC TGCGCCTGGC CGAGGTGGCG GCGGCGGTCG GCGGCAGGCT GGTCGCCGCC
GACCCGACCG CCGCAGTCAC CGGTTCGGTC GAGTTCGACT CCCGCAAGGT TGGCCCGGGT
GGGCTTTTCG TCGCGTTCCC CGGGGAGCAG GTGGACGGGC ACGACTATGC CGAAGGGGCG
ATCCGGGCGG GCGCGGTGGC GGTGCTCGGC ACCCGTCCGG TGCCCGCTGT GCCGATGGTG
CTGGTCGACG ACGCCCAGGC GGCGCTGGGC CGGCTGGCCC GAGCGGTGGT GGACCGGCTG
CCCGGCCTGA CCGTCATTGG CCTCACCGGC TCCTCCGGGA AGACCAGCAC CAAGGATCTG
ATCGCCGCGC TCACCTCCCG GCTCGGGCCG ACGGTCGCGC CCCCCGGGTC GTTCAACAAC
GAGCTGGGGC ACCCGTACAC GGCGCTGCAG GCCGGCCCGG ACACGCGCTA CCTCGTACTG
GAGAAGGGCG CCCGGGGGGT GGGGCACATC CGCTACCTCT GCGACGTGGT GCCGCCACAG
ATTTCCGTGG TGCTCAACGT CGGGGTGGCC CACATCGGTG AGTTCGGCTC CCGGGAGACC
ATCGCCCTGG CAAAAGGGGA GCTGGTGGCG GCGTTGCCGG CGGACGGGCT GGCCGTACTC
AACGCCGACG ACGGGCTTGT CGCCGCGATG GCCACGCGAA CCCAGGCGCG AGTAATCCGG
TACGGCGAGG CCGCGGAGGC CGACATCCGG GCCGTCGACG TGGTGCTGGA CGAGCGGGGC
CGGCCGTCGT TCACGCTGGT GACGCCGGAG GGTGAGGCGC CGGTGCGGCT CGGGCTGACC
GGCCGACACC AGGTGTCCAA CTCACTCGCC GCTGCCGCCG TGGCCCGGGA ACTGGGCATG
CCGTTGACGG AACTGGCGAT CGTCCTGGGA GAAATGGGAC TGGTTTCGAC CCGCCGGATG
GACGTGTTCG AGCGCATCGA CAGTGTCACC GTCATCGATG ACTCGTACAA CGCCAACCCC
GCCTCGATGG AGGTGGCCTT GCGGGCACTG GCCAGCATCG GCCAGCGGCG GCGCACGGTG
GCGGTGCTCG GCTACATGGC CGAGCTGGGA TCGTACGAGC ATGACGGGCA CGTCGAGGTC
GGCCGACTCG CGGCGGAACT CGGTGTGGAC CGCCTGCTCG TGGTGGGCGA GGCGGCGGCG
CCAATCCATG AGGGCGCAAC ATCGGTACGT GACTGGGGAG GAGAATCGGT GCAGCTCACC
GATCAGGCGG ACGCCGTCGA GGTGCTGCGG GGCGACCTGC GGCCAGGTGA CGTCGTCCTG
GTTAAGGGCT CGCGGTACCG CACCTGGGAG GTGGCGGACG CGCTTCGCGT CGACGCCGTG
GCCGACCAGG CTGCGGGGGC GACCGGGGAC GGTGGCCCGG CATGA
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| Protein sequence | MIPLRLAEVA AAVGGRLVAA DPTAAVTGSV EFDSRKVGPG GLFVAFPGEQ VDGHDYAEGA
IRAGAVAVLG TRPVPAVPMV LVDDAQAALG RLARAVVDRL PGLTVIGLTG SSGKTSTKDL
IAALTSRLGP TVAPPGSFNN ELGHPYTALQ AGPDTRYLVL EKGARGVGHI RYLCDVVPPQ
ISVVLNVGVA HIGEFGSRET IALAKGELVA ALPADGLAVL NADDGLVAAM ATRTQARVIR
YGEAAEADIR AVDVVLDERG RPSFTLVTPE GEAPVRLGLT GRHQVSNSLA AAAVARELGM
PLTELAIVLG EMGLVSTRRM DVFERIDSVT VIDDSYNANP ASMEVALRAL ASIGQRRRTV
AVLGYMAELG SYEHDGHVEV GRLAAELGVD RLLVVGEAAA PIHEGATSVR DWGGESVQLT
DQADAVEVLR GDLRPGDVVL VKGSRYRTWE VADALRVDAV ADQAAGATGD GGPA
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