Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3427 |
Symbol | |
ID | 5704108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3954085 |
End bp | 3955029 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641272854 |
Product | RluA family pseudouridine synthase |
Protein accession | YP_001538220 |
Protein GI | 159038967 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0544491 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCGG CATACGCCCC CGGCGGCGGC CACCGATCGC TGCCGGTTCC GGACGGGCTC GACGGAATGC GCCTCGACCA GGCCGTCGCA CGGCTCTTCG GGCTCTCCCG GACGTCCGCG GCGGCCCTGG TCGACGAGGG TGCCGCGCTC GTCGACGGCA CAGTACGGGT CAATTCGTAC AAGGTCCGCG CGGGAGCCTG GCTGGAGGTG ACGCTGCCGG CACCGGCCGC CCCGCCGGCC GTCGTGCCGC AGGCGGTGTC CGGCCTCCGC GTCGTGTACG CCGACGACGA CATCGTGGTG GTGAACAAGC CGGTCGGCGT GGCCGCCCAC CCCAGCCCAG GTTGGAGCGG ACCGACCGTG ATCGGTGGAC TTGCCGCGAT CGGTCACCGC ATCGCCACCA GCGGTGCCGC CGAGCGGCAG GGCGTGGTGC ACCGGCTCGA CGTCGGCACC ACCGGGATCA TGGTGGTGGC CAAGAGCGAA CAGGCATACA CAGGCCTGAA GCGGGCGTTC AAGTACCGCG AGGTGGAGAA GCGCTACCAC GCCGTGGTGC AGGGCCACCT CGATCCGTTA CGCGGCACCG TCGACGCACC GATCGACCGG CACCCACACC ACGACTACCG CTGGGCGGTG GTCTCTGGCG GCAAGCCCAG CATCACCCAC TACGACACCC TTGAGGCGTT CCCGGCGGCC AGCCTGGTGG ACGTACGGCT GGAGACGGGC CGAACCCACC AGATCCGGGT GCACTTCTCG ACGCTGCGCC ATCCATGTGT GGGCGACCTC ACGTACGGAG CCGATCCCAC CCTCGCCAGC CGGCTTGGCC TGGATCGGCA GTGGTTGCAC GCTCGGGAGC TGGCGTTCCG CCATCCCCGT ACGGGGGACG AGGTCCGCTT CGTCAGCAGT TACCCTGACG ACCTGGACCG CGCTCTGGCA ATCCTGCGGG ACTGA
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Protein sequence | MTAAYAPGGG HRSLPVPDGL DGMRLDQAVA RLFGLSRTSA AALVDEGAAL VDGTVRVNSY KVRAGAWLEV TLPAPAAPPA VVPQAVSGLR VVYADDDIVV VNKPVGVAAH PSPGWSGPTV IGGLAAIGHR IATSGAAERQ GVVHRLDVGT TGIMVVAKSE QAYTGLKRAF KYREVEKRYH AVVQGHLDPL RGTVDAPIDR HPHHDYRWAV VSGGKPSITH YDTLEAFPAA SLVDVRLETG RTHQIRVHFS TLRHPCVGDL TYGADPTLAS RLGLDRQWLH ARELAFRHPR TGDEVRFVSS YPDDLDRALA ILRD
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