| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3369 |
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| Symbol | rpsA |
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| ID | 5707993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 3890376 |
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| End bp | 3891857 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641272795 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001538162 |
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| Protein GI | 159038909 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.412554 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0109188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGCA GCATCGAGGC CCCCTCGAGC GCCACCAAGG TCACCGTCGA CGATCTCGGG
AGCGAAGAGG CTTTCCTCGC CGCGATCGAC GAGACCATCA AGTACTTCAA CGACGGCGAC
ATTGTCGAAG GCACCGTCGT CAAGGTCGAT CGGGACGAGG TCCTGCTCGA CATCGGCTAC
AAGACCGAGG GCGTCATCCC CTCTCGAGAG CTGTCGATCA AGCACGACGT GGACCCCGCC
GAGGTTGTCT CGGTCGGTGA CCACATCGAG GCCCTTGTCC TTCAGAAGGA GGACAAGGAG
GGGCGTCTGA TCCTCTCGAA GAAGCGGGCG CAGTACGAGC GCGCCTGGGG CACGATCGAG
AAGATCAAGG ACGAGGACGG TGTCGTCCGT GGCTCGGTCA TCGAGGTGGT CAAGGGTGGC
CTGATCCTCG ACATCGGGCT GCGTGGCTTC CTGCCGGCTT CCCTGGTCGA GATGCGCCGC
GTGCGGGACC TCCAGCCGTA TGTCGGACGC GAGCTCGAAG CCAAGATCAT CGAGTTGGAC
AAGAACCGCA ACAACGTGGT TCTGTCCCGC CGGGCCTGGC TCGAGCAGAC GCAGTCCGAG
GTGCGCACCG AGTTCCTCAA CAAGCTGCAG AAGGGTCAGG TCCGCAAGGG CGTCGTGTCG
TCGATCGTCA ACTTCGGTGC GTTCGTCGAC CTGGGCGGCG TGGACGGCCT GGTGCACGTC
TCCGAGTTGT CCTGGAAGCA CATCGACCAC CCGTCCGAGG TGGTCGAGGT GGGCCAGGAG
GTCGAGGTCG AGGTCCTGGA CGTTGACCTG GACCGCGAGC GGGTCTCGCT GTCGCTGAAG
GCGACCCAGG AGGACCCGTG GCGCCAGTTC GCCCGCACCC ACGCGATCCA GCAGATCGTG
CCCGGTAAGG TCACCAAGCT GGTGCCGTTC GGCGCGTTCG TCCGGGTCGA CGACGGCATT
GAGGGCCTGG TCCACATCTC CGAGCTGGCC GAGCGGCACG TGGAGATCCC GGAGCAGGTC
GTTCAGGTCG GCTCCGAGGT CATGGTCAAG GTCATCGACA TCGACCTGGA GCGGCGCCGG
ATCTCGCTGT CGCTCAAGCA GGCCAACGAG GGCTTCGTCG AGGGTGAGGA GCACTTCGAC
CCGACCCTCT ACGGCATGGC CGCGACCTAC GACGCCGAGG GCAACTACAT CTACCCCGAG
GGTTTCGACC CGGAGACGGG CGAGTGGCTC GAGGGCTACG AGAAGCAGCG CGAGACCTGG
GAGCAGCAGT ACGCCGAGGC GCGTCAGCGC TGGGAGGCCC ACCAGAAGCA GGTGCAGGCA
TCCCGCGCCG CCGACGCCGA GGCCGCTGCC AACCCGCCGG CTGCCGGCCC CACCACCACG
ACGACCGCGG CCCCGAGCCG GCCGGCGGAG GAGCCGGCTG GCACCCTCGC CACCGACGAG
GCGCTCGCCG CCCTGCGGGA GAAGCTCGCT GGCGGCAAGT GA
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| Protein sequence | MTSSIEAPSS ATKVTVDDLG SEEAFLAAID ETIKYFNDGD IVEGTVVKVD RDEVLLDIGY
KTEGVIPSRE LSIKHDVDPA EVVSVGDHIE ALVLQKEDKE GRLILSKKRA QYERAWGTIE
KIKDEDGVVR GSVIEVVKGG LILDIGLRGF LPASLVEMRR VRDLQPYVGR ELEAKIIELD
KNRNNVVLSR RAWLEQTQSE VRTEFLNKLQ KGQVRKGVVS SIVNFGAFVD LGGVDGLVHV
SELSWKHIDH PSEVVEVGQE VEVEVLDVDL DRERVSLSLK ATQEDPWRQF ARTHAIQQIV
PGKVTKLVPF GAFVRVDDGI EGLVHISELA ERHVEIPEQV VQVGSEVMVK VIDIDLERRR
ISLSLKQANE GFVEGEEHFD PTLYGMAATY DAEGNYIYPE GFDPETGEWL EGYEKQRETW
EQQYAEARQR WEAHQKQVQA SRAADAEAAA NPPAAGPTTT TTAAPSRPAE EPAGTLATDE
ALAALREKLA GGK
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