| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3360 |
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| Symbol | |
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| ID | 5707984 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 3879256 |
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| End bp | 3881124 |
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| Gene Length | 1869 bp |
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| Protein Length | 622 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641272786 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_001538153 |
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| Protein GI | 159038900 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.957899 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00356234 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGCTTC GCACCGACCT CCGCAACGTC GCCATCATCG CTCACGTCGA CCACGGCAAG
ACCACCCTGG TCGACGCCAT GTTGCGACAG GCCGGCGCCT ACGGTGCCCG GGGCGAGGTG
ACCGAGCGGG TGATGGACTC GATGGACCTC GAACGCGAGA AGGGCATCAC CATCCTCGCG
AAGAACACCG GTGTGCGGTA CCTGCCGGCC GACGGCTCCG ACGCGGTGAC GATCAACATC
ATCGACACCC CAGGGCACGC CGACTTCGGC GGCGAGGTGG AGCGCGGCCT CACCATGGTC
GACGGGGTGC TGCTGTTGGT GGACGCGAGT GAGGGCCCCC TGCCACAGAC CCGGTTCGTG
CTCCGCAAGG CCCTGCGGGC GCGCCTACCG ATCATCCTCG TCATCAACAA GGTGGACCGA
CCGGACGCCC GGATCAAGGA AGTCGTGGAT GACACGTACG AACTCTTCCT CGACCTGGAC
GCCGACGAGG AGCAGATCGA CTTCCCGATC GTCTACGCCT GCGCCCGCGA CGGAATCGCC
TCGCTCACCC AGCCCGCCGA CGGCGCCGTC CCGCAGGACA GCCACAACCT CGAACCACTG
TTCCGCGTCC TGCTCGACAC CATCCCGCCG CCCGCGTACG ACGAGCAGTC CCCGCTCCAG
GCACACGTCA CCAACCTGGA CGCCTCGCCG TTCCTTGGCC GGCTCGCCCT GTGCCGGGTC
CGGCAGGGCA CGATCGCCAA GGGTCAGACC GTCGCCTGGT GCCGCACCGA CGGCAGCAGC
CAGCGGGTAC GCATCTCCGA GCTGCTGATG ACCGAGGGTC TGGAGAGCAA GCCGGCCGAG
TCCGCCGGGC CGGGCGACAT CATCGCCGTC GCCGGCATCC CCGAGATCAT GATCGGTGAG
ACGCTCGCCG ACGCGGAGGA CCCACGGCCG CTGCCGCTGA TCACTGTTGA CGAGCCGGCC
ATCTCGATGA CCATCGGCAC CAACACCTCA CCCCTGGTCG GCCGGGCCAA GGGCGCCAAG
GTCACCGCGC GGATGGTCAA GGACCGGCTG GACCGGGAAC TGATCGGCAA CGTCTCGCTG
CGGGTCCTGC CGACCGAACG GCCCGACGCC TGGGAGGTGC AGGGCCGCGG CGAACTGGCC
CTGGCCATCC TGGTCGAGCA GATGCGCCGC GAGTCGTACG AGCTGACCGT CGGTAAACCG
CAGGTTGTCA CCAGGGAGAT CGACGGCAAG ACCTGTGAAC CGGTGGAACG GCTGACCATC
GACGCCCCCG AGGAGCACCT GGGCTCGATC ACCCAACTGC TGGCCACCCG CAAGGGCCGG
ATGGAGCAGT TGGTCAACCA CGGCACCGGT TGGATCCGTA TGGAATGGCT GGTCCCGGCG
CGTGGTCTGA TCGGATTCCG CACCCAGTTC CTCACCGAGA CGCGGGGAAC GGGCATTCTG
CACCATGTCT TCGAGGCGTA CGAGCCCTGG TTCGGCCAGC TGCGGACCCG TAACAACGGC
TCGCTGGTCG CCGACCGCTC CGGCGCCGCC ACCGCCTTCG CGATGATGAA CCTGCAGGAG
CGCGGCACCC TGTTCGTCGA ACCGAGTACC GAGGTGTACG AGGGCATGAT CGTCGGCGAG
AACTCCCGTT CCGATGACAT GGACGTCAAC ATCACCAAGG AGAAGAAGCT CACCAACATG
CGCTCCTCGA CCGCGGAGGA GACGGAGAAG CTGATTCCAC CGCGCAAGCT CTCCCTGGAG
CAGGCCCTGG AGTTCTGCCG TGAGGACGAG TGCGTCGAGG TGACCCCGGC GGCGGTGCGG
ATCCGCAAGG TGCTCCTCGA CCAGACGCAG CGGGCCCGCG CAGCCGCCCG CCGCAAGCAC
GCCGGCTGA
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| Protein sequence | MQLRTDLRNV AIIAHVDHGK TTLVDAMLRQ AGAYGARGEV TERVMDSMDL EREKGITILA
KNTGVRYLPA DGSDAVTINI IDTPGHADFG GEVERGLTMV DGVLLLVDAS EGPLPQTRFV
LRKALRARLP IILVINKVDR PDARIKEVVD DTYELFLDLD ADEEQIDFPI VYACARDGIA
SLTQPADGAV PQDSHNLEPL FRVLLDTIPP PAYDEQSPLQ AHVTNLDASP FLGRLALCRV
RQGTIAKGQT VAWCRTDGSS QRVRISELLM TEGLESKPAE SAGPGDIIAV AGIPEIMIGE
TLADAEDPRP LPLITVDEPA ISMTIGTNTS PLVGRAKGAK VTARMVKDRL DRELIGNVSL
RVLPTERPDA WEVQGRGELA LAILVEQMRR ESYELTVGKP QVVTREIDGK TCEPVERLTI
DAPEEHLGSI TQLLATRKGR MEQLVNHGTG WIRMEWLVPA RGLIGFRTQF LTETRGTGIL
HHVFEAYEPW FGQLRTRNNG SLVADRSGAA TAFAMMNLQE RGTLFVEPST EVYEGMIVGE
NSRSDDMDVN ITKEKKLTNM RSSTAEETEK LIPPRKLSLE QALEFCREDE CVEVTPAAVR
IRKVLLDQTQ RARAAARRKH AG
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