Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3336 |
Symbol | |
ID | 5708291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3847618 |
End bp | 3849468 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641272763 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_001538130 |
Protein GI | 159038877 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family [TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00306919 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCTCCC CCACCGACCA GCGCCCCGCC GCGCTGGAGA CGCTGCGGCG TGTCTTCGGC TACGACGCCT TCCGGGGCTT CCAGCAGGAG GTCATCGCAC ACCTGACGGC CGGCGGGGAC GCCTTGGTGT TGATGCCCAC CGGTGGCGGC AAGTCGCTGT GCTACCAGAT CCCGGCACTG CTGCGGGACG GAGTCGCGGT GGTCGTGTCG CCGTTGATCG CACTGATGCA GGACCAGGTC GACGCGCTGA CCGCGGTCGG GGTTCGGGCC GGCTTCCTCA ACTCGACGCT GGACCTCGAC GCCCGTCGCG CCGTCGAGCG GGCCTTCGTC GCCGGTGACC TGGACCTGCT CTACCTCGCC CCGGAAGCCC TGGGCACCCG GGGCGTGCAG CACCTGCTCG ACCAAGGGAA CATCAGCCTG TTCGCGATCG ACGAGGCACA CTGTGTGTCG CAGTGGGGGC ACGACTTCCG CCCGGACTAC CTCACCCTGT CGGTGCTGCA CGAGCGTTGG CCCGGGGTGC CCCGCATCGC GTTGACCGCC ACCGCGACCA GCGCCACTCG GGCCGAGATC TCGACCCGGC TGCAGCTCAC CTCGGCCCGG CACTTTGTCG CCAGCTTCGA CCGCCCCAAC ATCCAGTACC GCATCGTCCC GAAGCGGGAG CCGAAGCGGC AGCTGCTGGC CCTGCTGCGG GACGAGCACC CGGGGGATGC CGGAATCGTC TACTGCCTGT CCCGGGCCAC CGTGGAAAAG ACAGCGGAGT TCCTGGTCGA CAACGGTATT GCCGCACTGC CGTACCACGC CGGCCTGGAC GCGGCCACCC GAGCTCGACA CCAGCAGCGC TTCCTGCGGG AGGACGGCCT GGTCATGGTC GCGACGATCG CGTTCGGGAT GGGCATCGAC AAGCCTGACG TGCGGTTCGT CGCCCACCTC GACCTGCCGA AGTCGGTGGA GGGCTACTAC CAGGAGACCG GCCGCGCCGG GCGGGACGGC CTGCCGTCGA CGGCCTGGCT CGCCTACGGT CTGACGGATG TGGTGCAGCA ACGCCGGCTG ATCGACACCT CGGAGGGGGA TCTGGCGCAC CGGCGTAACC TCGCCGCCCA CCTGGAGGCG ATGCTCGCGC TCTGCGAAAC GGTCCGCTGT CGCCGGGTGC AGCTGCTGGA CTACTTCGGC GAGACCGCCA CCGCCTGCGG CAACTGCGAC ACGTGCCTGC AGCCACCCGA GTCGTGGGAC GGCACGATCG CCGCGCAGAA GCTGCTGTCC ACGGTGTACC GGCTCGACCG GGAGCGACAC CAGCGGTTCG GCACCGGGCA CTGTGTCGAT ATCCTGCTCG GCCGCGCCAC CGACAAGGTC CAGCAGCACC GGCACGACTC CCTGACAGTG TTCGGGATCG GCACCGAGCT GAGCGAGGCG GAGTGGCGGG GTGTGGTCCG GCAGCTGCTC GCCGAAGGGC TGCTGGCGGT TGAGGGCGAC TACGGCACCC TGGCCCTCAC CGACACCAGC GCGGAGGTGC TGGGCCGGCG CCGCACCGTC ATGCTGCGCC GCGAACCGGC CCGGACCGCC CGGCCGGCGA AGCCACGCGG CGCGGCCACC ATGGTCGCCG AGCTGGCCCC GGCCGCCGCC GAGGTCTTCG AGCGGCTACG CGCCTGGCGG GCCGCCACGG CCAGGGAACA GGGCGTGCCC GCCTACGTGA TCTTCCACGA CGCCACGCTG CGGCAGATCG CCAGCGACGC ACCGTCAGCA TTGGCTGACC TGGCCCGGGT CAGTGGTGTC GGCGAGGCGA AACTCGCGAA GTACGGCGAG CAGGTGCTGG CCGTCCTCGC CGGCGGCGAT GCGGACCCAC ACACCGCCTG A
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Protein sequence | MPSPTDQRPA ALETLRRVFG YDAFRGFQQE VIAHLTAGGD ALVLMPTGGG KSLCYQIPAL LRDGVAVVVS PLIALMQDQV DALTAVGVRA GFLNSTLDLD ARRAVERAFV AGDLDLLYLA PEALGTRGVQ HLLDQGNISL FAIDEAHCVS QWGHDFRPDY LTLSVLHERW PGVPRIALTA TATSATRAEI STRLQLTSAR HFVASFDRPN IQYRIVPKRE PKRQLLALLR DEHPGDAGIV YCLSRATVEK TAEFLVDNGI AALPYHAGLD AATRARHQQR FLREDGLVMV ATIAFGMGID KPDVRFVAHL DLPKSVEGYY QETGRAGRDG LPSTAWLAYG LTDVVQQRRL IDTSEGDLAH RRNLAAHLEA MLALCETVRC RRVQLLDYFG ETATACGNCD TCLQPPESWD GTIAAQKLLS TVYRLDRERH QRFGTGHCVD ILLGRATDKV QQHRHDSLTV FGIGTELSEA EWRGVVRQLL AEGLLAVEGD YGTLALTDTS AEVLGRRRTV MLRREPARTA RPAKPRGAAT MVAELAPAAA EVFERLRAWR AATAREQGVP AYVIFHDATL RQIASDAPSA LADLARVSGV GEAKLAKYGE QVLAVLAGGD ADPHTA
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