Gene Sare_3310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3310 
Symbol 
ID5707177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp3820178 
End bp3821608 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content64% 
IMG OID641272737 
ProductFeS assembly protein SufB 
Protein accessionYP_001538104 
Protein GI159038851 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01980] FeS assembly protein SufB 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000706368 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCGAGC AGATCGTTCA GCCCCTGACC CAGGAGGAGC AGCTCGCCGC CCTCGGTCGC 
TACGAGTACG GCTGGGCCGA CCCCGACGTG GCCGGAGCTG TCGCTCAACG TGGCCTCAAC
GAGGCAGTGG TACGGGACAT CTCGGCCAAG AAGGCCGAGC CGGCCTGGAT GCTCGACCTG
CGGCTGAAGG GTCTGCGGTT GTTCGACCGC AAGCCCATGC CCGCCTGGGG CGCCGATCTC
ACCGGGATCG ACTTCGACAA CATCAAGTAC TTCGTGCGCT CCACCGAGAA GCAGGCGACC
AGCTGGGAGG ACCTGCCGGA GGACATCAAG AACACCTACG ACAAGCTGGG CATCCCCGAG
GCGGAGAAGC AGCGGCTGGT CGCGGGCGTG GCGGCGCAGT ACGAGTCCGA GGTCGTCTAC
CACAAGATCC GCGATGATCT GGAGGAGCAG GGCGTCGTCT TCCTCGACAC CGACACGGCC
CTCAAGGAGC ACGAGGACCT CTTCAAGGAG TACTTCGGCA CGGTGATCCC GGTTGGCGAC
AACAAGTTCG CCGCCCTGAA CACCGCTGTC TGGTCCGGCG GCTCGTTCAT CTACGTGCCG
AAGGGTGTGC ACGTGGAGAT CCCGCTCCAG GCGTACTTCC GGATCAACAC GGAGAACATG
GGCCAGTTCG AGCGGACGCT GATCATCGTC GACGAGGGTG CGTACGTGCA CTACGTCGAA
GGCTGTACCG CACCCATCTA CTCCTCGGAC TCGCTGCACA GCGCCGTGGT GGAGATCATC
GTCAAGAAGA ACGCCCGCTG CCGGTACACC ACCATCCAGA ACTGGTCGAA CAACGTCTAC
AACCTGGTCA CCAAGCGTGC CGTGTGCCAC GAGGGCGCAA CCATGGAGTG GATCGACGGC
AACATCGGCT CCAAGGTCAC CATGAAGTAC CCAGCCGTGT TCATGACCGG TGAGCACGCC
AAGGGCGAGG TGCTCTCGGT GGCCATGTCC GGCGAGGGCC AGCACCAGGA CGCCGGCGCC
AAGATGGTGC ACGCCGCACC GCACACCAGC AGCACCATCG TCTCGAAGTC GATTGCCCGC
AGCGGCGGCC GCACCTCGTA CCGGGGTCTG GTGCAGGTGC TGGAGGGTTC GCACAGCAGC
AGGAGCACCG TGAAGTGCGA CGCGCTGCTG GTCGACACCA TCTCCCGCTC GGACACCTAC
CCGTATGTCG ACATCCGCGA GGACGACGTG TCGATGGGGC ACGAGGCAAC CGTCTCGAAG
GTCAGCGAGG ACCAGCTCTT CTACCTGATG AGTCGGGGAC TGAGCGAGGA CGAGGCGATG
GCGATGATCG TCCGCGGCTT CATCGAGCCG ATCGCCAAGG AACTCCCGAT GGAGTACGCG
CTGGAGCTCA ACCGCCTGAT CGAGCTGCAG ATGGAGGGCG CGGTCGGCTG A
 
Protein sequence
MTEQIVQPLT QEEQLAALGR YEYGWADPDV AGAVAQRGLN EAVVRDISAK KAEPAWMLDL 
RLKGLRLFDR KPMPAWGADL TGIDFDNIKY FVRSTEKQAT SWEDLPEDIK NTYDKLGIPE
AEKQRLVAGV AAQYESEVVY HKIRDDLEEQ GVVFLDTDTA LKEHEDLFKE YFGTVIPVGD
NKFAALNTAV WSGGSFIYVP KGVHVEIPLQ AYFRINTENM GQFERTLIIV DEGAYVHYVE
GCTAPIYSSD SLHSAVVEII VKKNARCRYT TIQNWSNNVY NLVTKRAVCH EGATMEWIDG
NIGSKVTMKY PAVFMTGEHA KGEVLSVAMS GEGQHQDAGA KMVHAAPHTS STIVSKSIAR
SGGRTSYRGL VQVLEGSHSS RSTVKCDALL VDTISRSDTY PYVDIREDDV SMGHEATVSK
VSEDQLFYLM SRGLSEDEAM AMIVRGFIEP IAKELPMEYA LELNRLIELQ MEGAVG