Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3122 |
Symbol | |
ID | 5706366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3551105 |
End bp | 3551704 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641272554 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_001537921 |
Protein GI | 159038668 |
COG category | [R] General function prediction only |
COG ID | [COG1279] Lysine efflux permease |
TIGRFAM ID | [TIGR00948] L-lysine exporter |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.77034 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00328484 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATCAATT CCGCGCTCGC CGGCTTTACC CTCACCGTCG CCCTGGTCGC CGCCATCGGG GCGCAGAACG CGTTCGTGCT GCGTCAGGGG CTACGCCGGG AGCACGTCAT TCCCGTCGTG CTCACCTGCG CCGCCTCGGA CGCCCTGCTG ATCGGTGCCG GCATCGCCGG GATGGGCGCC CTGGTGGCAG GCCGCCCGAC GCTGGTCACC GCCGTGCGGT GGGCTGGTGC CGCATTCCTG CTGTGCTATG CACTGCTCGC CGCCCGGCGA GCGCTACGCC CGCACGCGCT CCGGCCGGCC GAGGACCCGC CGGCGGCACG GCTGCGGACC ACCCTGTTGA CCTGCCTCGC CTTCACCTAC CTCAATCCAC ACGTCTACCT GGACACCGTG CTGCTGCTGG GCGGTGTCGG GCAGCAGCAC GCGTACCGAT GGGCGTTCTG GGCGGCTGCG GCCACCGCCA GCCTCACCTG GTTCACCGTG CTCGGCGCAG GCGCGTACCG GCTCGGGCCC CTGCTCGCCC GAACCGCCGT CTGGCGGATA CTCGATGGCG CGGTCGCCGT CATGATGGCC ACGCTCGCGG CGGCGCTACT GCTGGTCTGA
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Protein sequence | MINSALAGFT LTVALVAAIG AQNAFVLRQG LRREHVIPVV LTCAASDALL IGAGIAGMGA LVAGRPTLVT AVRWAGAAFL LCYALLAARR ALRPHALRPA EDPPAARLRT TLLTCLAFTY LNPHVYLDTV LLLGGVGQQH AYRWAFWAAA ATASLTWFTV LGAGAYRLGP LLARTAVWRI LDGAVAVMMA TLAAALLLV
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