Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3118 |
Symbol | |
ID | 5706362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3546188 |
End bp | 3546892 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641272550 |
Product | hypothetical protein |
Protein accession | YP_001537917 |
Protein GI | 159038664 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03083] uncharacterized Actinobacterial protein TIGR03083 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.27418 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00370364 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTGGAGC AGACACCCGA CAACCCGCCG GACACCTTGC CGGTGGTACG GGCAGCGTTT CGGGACGAGT GCGCCCGGCT CGTCGCCGAG CTGCGTGACC TGACCGAGGC TGACCTCCAC CGGCCCACCA ACTGCCCACC GTGGACCGTC CGGGAACTCC TCGCCCACGT GCACACCGGT GTCGGCCGGC TCGCCGGCAT GCTCGCCGCC CCCGCCCCGC CCCGCGCACA GGTCGACGCC GCCGGCTACT TCGGCGCGGC CAAGTTCACC CCTCCGGTGG ATGCCGCCCG CATCGAGGGC GGCCACCGGG CGGGACGGCA ACTGGACGCG GCGGCGCTCG CCGATGACCT GGACCGGGTC CGGCGGGCCA CCCTTAACGC AGTTGACGCG CAGCCACCCG GTCGGCTGGT CCTCACCCGG CACGGAGACG CGATGACGAT GGTGGAGTTC CTGCGTACCC GGGTCGTCGA GGTGGGGGTG CACGGACTGG ACCTGGCCGC GGCGCTCGAC CGGCAACCGT GGCTGACCCC GGCCGCCGCC GCGGTCGTGG CCGACCTGCT CACCGGTGGA CGTCCGGTGC CGGCCGCCCT GAACTGGGAC CGGCTGACCC TGATCCGCAA GACCACCGGT AGGACGCCGC TCACGCCCGT GGAACAGGCG GTCATCGAGG CTGCCGACTT CCGTTGGCTG ACCTTCTCGC CCTGA
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Protein sequence | MVEQTPDNPP DTLPVVRAAF RDECARLVAE LRDLTEADLH RPTNCPPWTV RELLAHVHTG VGRLAGMLAA PAPPRAQVDA AGYFGAAKFT PPVDAARIEG GHRAGRQLDA AALADDLDRV RRATLNAVDA QPPGRLVLTR HGDAMTMVEF LRTRVVEVGV HGLDLAAALD RQPWLTPAAA AVVADLLTGG RPVPAALNWD RLTLIRKTTG RTPLTPVEQA VIEAADFRWL TFSP
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