Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3115 |
Symbol | |
ID | 5706555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 3543390 |
End bp | 3544181 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641272547 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001537914 |
Protein GI | 159038661 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0100122 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACCTCA CCGACCGGGT GGCGGTGATC ACCGGTGGGG CCGGTGGCAT CGGGTCCGCA CTGGCCCGGC GGTTTGCGGC GGAGGGGGCC GAGGCCGTGG TGGTGGCCGA CCTGGACGCC GCGGCCGCCC GCGCGGTCGC TGACGCCCTC GGACCGGTCG CCCGGCCCGT CGGCGTCGAC GTCACCGAAC AGGAGCAGAT CCGCGCGCTG GTCGCCGACA CCGAACGGCG GTACGGACGC ATCGACCTGT TCTGCGCCAA CGCCGGCGTG GCCACCGGCG GGGGAGTGGA CGCCCCGGAC GCCGACTGGG ACCGGGCGTG GCGGGTCAAC GTGCTTTCCC ACGTCTACAC CGCCCGGGCG GTGCTGCCGG CGATGCTCGC CCACGGTGGC GGACACCTGC TCATGACCTG CTCGGCCGCG GGTGTGCTGA CCGCGGTCGG GGACGCGCCC TACACGGCCA CGAAGCACGC CGCGGTGGCC TTCGCCGAGT GGCTGGCCAT CACCTACCGG GACCGGGGTA TCCGGGTGAG CGCACTGTGT CCACAGGGCG TCGACACCCC GATGTTGTCC GAAGGACTGG CCGCGGGGCA CCTGGCCGCC CGGGTCGTCG CCGCCTCCGG CGAGGTGCTC ACACCGGACC AGGTGGCCGA CGCGGTGGTC GCCGGGCTCG CTGAGGAACG GTTCCTGATC CTGCCGCACC CGGAGGTTGC CGGGTACGCC CGCCGCCGGG CCGAGGACCC CGACGGCTGG CAGGCCGGTC TGCGTAAACT CGTCCGGCGG CTGACCGGCT GA
|
Protein sequence | MNLTDRVAVI TGGAGGIGSA LARRFAAEGA EAVVVADLDA AAARAVADAL GPVARPVGVD VTEQEQIRAL VADTERRYGR IDLFCANAGV ATGGGVDAPD ADWDRAWRVN VLSHVYTARA VLPAMLAHGG GHLLMTCSAA GVLTAVGDAP YTATKHAAVA FAEWLAITYR DRGIRVSALC PQGVDTPMLS EGLAAGHLAA RVVAASGEVL TPDQVADAVV AGLAEERFLI LPHPEVAGYA RRRAEDPDGW QAGLRKLVRR LTG
|
| |