| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2937 |
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| Symbol | |
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| ID | 5705242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 3328358 |
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| End bp | 3329431 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641272386 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_001537754 |
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| Protein GI | 159038501 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0803223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.127014 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCTACC TCAATCCGAG ACCGGAGCCG TCGCGTGTCG CACCGCTGGC CGAGCAGGCG
CCGACGGACG AGCCGGCCTT CGTTCGCCAC ATAGAACGCC ATCGTCGCGA GCTTCAGGTG
CACTGCTACC GCATGCTCGG ATCGTTCGAG GACTCCGAGG ACCTGGTTCA GGAGACATTT
CTGCGTGCGT GGCGCGGCCG CCATGGCTTC AAGGGCACGT CGACGATGCG AGCCTGGCTC
TACCGGATCG CCACCAACGC ATGTCTGGAC TTTCTCAGCC GCCACGCCCG CTGGCCACTG
ACCCACTCGT GGAGTCACTC GGTCGGCGGG GCGCCCGCGC CCGACGACGT GCCCTGGCTA
CAGCCATATC CGGACCACCT GCTCGACCTT GCCGAGCCCA GCGGACGCGA ACCGGACGCC
GTGGTCGTAG CCAAGGAAAC GATCGAGCTG GCGTTCCTCG TGGCCGTTCA GCATCTGCCA
CCACGGCAGC GAGCCGTCCT GATCCTGCGC GACATCCTGG GTCAGTCCGC CAGCGACACG
GCCGGCGTCC TGGAGCTCAG CGTGCCAGCG GTGAACAGTG CACTGCAACG TGCCCGCATC
AGGTTGAGGG AACATCTTCC ACGACAACGA TCGCAGTGGA CACCAGAGGT GGGGCCGACG
CAGGCTGAGA AAGCTCTCGC GCGGCGCTAC ATCGCCGCGG TGGAAAATGC CGACGTGGAC
GCGATGGCTC AGCTGCTGCA CGACGACGTT CGCGCCACCA TGCCCATGCC GCAACCCTGC
GAGCCGTCGC AGTCCGGTCT GCCCAGCACC CGGTGGATCG GACGAGCCGC CTATCTCGCC
GGTTTCGGCA TGGGGCTCGA CCCCGCATCG CCTGCGTATT TTGGACAGTG GCTCTGTATT
CCCACCGAAG CCAATCGGCA ACCAGCGATT GCGTGCTACA CCCGCCGCGA GCAGCGAGAC
GTGTGGCAGG CACAAGTCAT CGACGTACTC CAGATTCGCG GTGACAAGAT TGTAGAGATC
ACCGCCTTCG GGCCTGAGAA CTTCACCAGG TTCGGTCTTC CACTCACCCG ATGA
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| Protein sequence | MSYLNPRPEP SRVAPLAEQA PTDEPAFVRH IERHRRELQV HCYRMLGSFE DSEDLVQETF
LRAWRGRHGF KGTSTMRAWL YRIATNACLD FLSRHARWPL THSWSHSVGG APAPDDVPWL
QPYPDHLLDL AEPSGREPDA VVVAKETIEL AFLVAVQHLP PRQRAVLILR DILGQSASDT
AGVLELSVPA VNSALQRARI RLREHLPRQR SQWTPEVGPT QAEKALARRY IAAVENADVD
AMAQLLHDDV RATMPMPQPC EPSQSGLPST RWIGRAAYLA GFGMGLDPAS PAYFGQWLCI
PTEANRQPAI ACYTRREQRD VWQAQVIDVL QIRGDKIVEI TAFGPENFTR FGLPLTR
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