| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2828 |
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| Symbol | |
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| ID | 5707906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 3212951 |
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| End bp | 3213709 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641272284 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001537654 |
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| Protein GI | 159038401 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0610793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCGGC TGGACGGCAA GGTGGCTCTC ATCACCGGCG GCGCGCGCGG CATGGGCAAG
TCACATGCCC GGCACTTCGT CGCCGAGGGC GCCCGGGTCG TCATCGGCGA CATCCTCGAC
GACCGGGGCA CGGCTGTGGC CGACCGCCTG GGGGATCGTT GCCGCTACGT GCACCACGAT
GTCACCAGCG AAGACGAGTG GGCCGGCGCC GTGGCCGCCA CCCTGGCGGC GTTCGACCGG
CTCGACGTGC TGGTCAACAA TGCCGGCGTC TTCCAGCACG CGCCGATCGC CACGATGGAT
CCAGCCGAGT TCCGGCATGT TGTCGACGTC AACCTGACCG GCTGTTGGCT CGGGATACAC
ACCGTGGTGC CGACGATGAC AACGGCCGGT GGCGGATCCA TCGTCAACGT GTCCTCCATC
GAGGGATTCG TCGGCGCGGC CGGCCTCTCG GCCTACAGTG CCAGCAAGTT CGGCATTCGC
GGCATCACCA AGTCGGCGGC GCAGGAGCTC GGGTCGGCCG GCGTCCGGGT CAACTCGGTT
CATCCTGGCG GCGTGATGAC CTCGATGGCG CGGACCGCGG CCGAGACCAT GCCCATCGTC
GACCCGGGCG CACTCCCCAG GTCGCTGCCG ATCGCCCGGT TCGCCGAGCC GGTGGAGGTC
TCCCGGCTGG TCGCGTTCCT CGCCTCGGAC GAGTCGTCGT ACACCACGGG CGCCGAGTTC
GTGGCCGACG GCGGGCTGCT CTCCGGGCCG GGGTACTGA
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| Protein sequence | MGRLDGKVAL ITGGARGMGK SHARHFVAEG ARVVIGDILD DRGTAVADRL GDRCRYVHHD
VTSEDEWAGA VAATLAAFDR LDVLVNNAGV FQHAPIATMD PAEFRHVVDV NLTGCWLGIH
TVVPTMTTAG GGSIVNVSSI EGFVGAAGLS AYSASKFGIR GITKSAAQEL GSAGVRVNSV
HPGGVMTSMA RTAAETMPIV DPGALPRSLP IARFAEPVEV SRLVAFLASD ESSYTTGAEF
VADGGLLSGP GY
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