Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2801 |
Symbol | |
ID | 5706157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 3180844 |
End bp | 3181770 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641272257 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001537627 |
Protein GI | 159038374 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.164593 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000184806 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACAGACC AGCAGTTCGC GTTGGATGGC ATGGTCGCGA TCGTGACCGG GGCGGGCAAC GGCCTGGGTC GCGCCGAGGC CGTTGAGTTG GCAGCCAGCG GCGCCCGCCT CATCCTCAAC GACCTTCCCG GCGACGCCGT GGCCGCCGTG GCCGCCGAGA TCGCGGCAGC GGGCGGCGAG GCCACCGTGT GCACCGGCGA CATCGGGGAA TGGTCGACCG GTGAGTCCCT GCTGGGCGCA GCCCTCGACA CGTACGGCAG GCTCGACATC CTGGTCAACA ACGCCGGCGT ACTCCGCGAC CGGATGGTCT TCACGATGTC GGCGCAGGAA TGGGACCTCG TCCTGCGAGT GCATCTGCGC GGTCACTTCG TGACCACCCG CCTGGCCACC GCCTACTGGC GCGAGCGGAG CAAGGAGCTC GGCTCCCCGG TCTACGGTCG GATCATCAAC ACCTCCTCCG AGGCGTTCCT GCTCGGCTCA CCCGGCCAGC CGAACTATGC TGCCGCGAAA GCCGGCATCG TGGCACTCAC CGTCGCGACC GCGCGTAGCT GTGCTCGGTA CGGCATACGG GCAAATGTCA TCTGTCCACG AGCACGTACC GCAATGACCG CCGACCTCAT GGGATCCACG CCCGAGGGGA CTGCCGATCC CCTGTCGCCA GCCCATGTCG CACCGCTCGT GCGGTACCTG GCCAGCCCGG CGGGAGACCC GATCAACGGC GAGGTCTTCG TGATCCACGG TGGCGTGGCA GCGGTACTGG CGCCACCCAC GGTGCGCGCG AGCTTTCAGA CCGAGGAAGG ATCCTGGTCG CCGAAGGGCC TGCACGACGC CCTGGGCCCC CTGTTCCAGC AGAGTCCGCC CGAGGCCGGG TTCGCCTGTC AGGCCACCCT GCCGCTGGCA ACGACCACGT TCGGTGAAGG CAGGTGA
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Protein sequence | MTDQQFALDG MVAIVTGAGN GLGRAEAVEL AASGARLILN DLPGDAVAAV AAEIAAAGGE ATVCTGDIGE WSTGESLLGA ALDTYGRLDI LVNNAGVLRD RMVFTMSAQE WDLVLRVHLR GHFVTTRLAT AYWRERSKEL GSPVYGRIIN TSSEAFLLGS PGQPNYAAAK AGIVALTVAT ARSCARYGIR ANVICPRART AMTADLMGST PEGTADPLSP AHVAPLVRYL ASPAGDPING EVFVIHGGVA AVLAPPTVRA SFQTEEGSWS PKGLHDALGP LFQQSPPEAG FACQATLPLA TTTFGEGR
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