| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2712 |
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| Symbol | |
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| ID | 5706771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 3089600 |
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| End bp | 3090805 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641272170 |
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| Product | transcriptional regulator, CdaR |
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| Protein accession | YP_001537540 |
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| Protein GI | 159038287 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.406741 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000611916 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGGCCTCG CGGAACGACT GGTCGTGCAC CGAACGCTCA CCGAATGTAG CCCGACGCTC
GTGGATCAGG TTGTCGGCGC GGTCGTGGAC CAGGTCCCGA CCTACCGCAA ACTGAGCGAC
ACGCAACTGC GGGAGGTCAC CGCCATCGCC CAGTGGGCAG TCACCCGGCT GTCCGAGATG
TGGGTCGACG GCACCCGGCT GACCGCCCGC GACATCAGCC GTTTCCGGGG CATCGGCGCC
ACCCGCGCCA CGGACGGTCG GCCGCTGCTG GCGGTACTCC GGGCCTACCG GGTCGCGGCG
GCCACCATCA CCGACGCCAT CGCCGAGCAC GCCCCGCCCG GCCTGACCGT CGCCGACCTC
GCCGCGCTGG TCCGGGCCCT CGTCGACGCG CTCGACGACC TGTCCGAGGC GCTGGCCAGC
GGCTACCAAC ACAAGGCCGC CGAACTGGTC ACCGACCGGA ACCGCCTGAT CGACGAACTC
CTGCAGGACC TGCTGGCCGG ACGGCAGACC TCGCCCGGCG CGCTGGCCGA CCGCACCGAA
CAGCTCAACG TCCGTGTTCC CGCCACGTTC GGCCTGCTCC TCGCCGTCGG TGGCCCGGCG
GGCCCGGACC CCTACCCGCC TCTCGCCGCC GCGCTCACCG AGTCGTCGGC TGTCGACACG
GACCACCGAC CGGCCGACCT GGCCACCGGT GCGTTGCTGA CCACGGTACG AGCCGGCGCC
CGCGTCCTGC TGCTCCCCGC CGGCCACGAC CGAGCCGCGA TCGAGGCGGC CGTGACCGCG
GGTGGTTGGC GTGCCTGCTC GATCGACGGT ACCGCCCCGG CGACCCTGCC CCAGGACTAC
CGGGTCGCCG CCGCCGCGCT CGAGCACGCA CCCGCGGAGG CGTTCACCCG CCGCCTCGTC
CTCGACCGCG GCGACGCGCT CACCGTCGCG GTGCTGCACG GTGCACCTCC CGTCGACCGC
GCCGCACTGC ACGCCGCGGT CTTCGGCCCG GTGCTCACCC CCGCGCACGC GCACCTGCTC
GAAGGGCTCC GCGCGTATCT CACCCACGGG TCGGCGATCG AGGCTGCGAC CGCGGTCGGG
CTGCACCCCC AGACCATGCG TCACCGCCTT CGCCGCCTCA CCGAGCTCAC CGGTCGCAGC
CCGACCCACC CCTGGGACCG GCTCGTACTC GCGGTGGCCC ACGCCTCGCT ACCGACCCGA
CGGTGA
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| Protein sequence | MGLAERLVVH RTLTECSPTL VDQVVGAVVD QVPTYRKLSD TQLREVTAIA QWAVTRLSEM
WVDGTRLTAR DISRFRGIGA TRATDGRPLL AVLRAYRVAA ATITDAIAEH APPGLTVADL
AALVRALVDA LDDLSEALAS GYQHKAAELV TDRNRLIDEL LQDLLAGRQT SPGALADRTE
QLNVRVPATF GLLLAVGGPA GPDPYPPLAA ALTESSAVDT DHRPADLATG ALLTTVRAGA
RVLLLPAGHD RAAIEAAVTA GGWRACSIDG TAPATLPQDY RVAAAALEHA PAEAFTRRLV
LDRGDALTVA VLHGAPPVDR AALHAAVFGP VLTPAHAHLL EGLRAYLTHG SAIEAATAVG
LHPQTMRHRL RRLTELTGRS PTHPWDRLVL AVAHASLPTR R
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