Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2632 |
Symbol | |
ID | 5706895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 2998054 |
End bp | 2998755 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641272092 |
Product | HAD family hydrolase |
Protein accession | YP_001537462 |
Protein GI | 159038209 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E [TIGR03351] phosphonatase-like hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.503423 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCGCCC GGGTGGGTAC GACGCGACTC GTCTGTTTCG ACATGGCCGG TACCACGGTC GCCGACGACG GTCTCGTCGC GCAGGCGTTC ACCCGCGCCC TGGACGAGGT CGGCTCGACA GCCATCGACC GGGACGCTGC GCTGCGCTAC GTGCGCGACA CCATGGGCGA GTCGAAAATC GCGGTGTTCC GGCACCTCAG CGGGAGTGAT GAGGCGGCGG CACGGCGACT CAACGGTGCC TTCGAGCGGG AGTACGCGCT TCTTGTGGAC GCCGGGCTCT GCGCGCCGAT CGACGGGGCC GAGCAACTGA TCGCCAAGCT CCGTGCCGCC GGGGTGCGTA CCGCGCTCAC CACCGGCTTC TCCCGGGCTA CCGCCGACCG AATCCTGTCC GCCCTGGGCT GGCGTGACCT CGCCGATCTG ACCCTGGTGC CCGCCGAGGC CGGGCGTGGA CGTCCCTACC CAGACCTGGT GCTCACCGCA CTGCTACGAC TGGGGGTCGA CGACGTCCGC CATGTCACCA CCGTCGGTGA CACCGCCTCG GACGTGCTCG CCGGCCGCCG TGCCGGCGCC GCCATCGTCG CCGGAGTGCT CACCGGCGCG CACGATGCCG CCACGCTGCG TGATGCGGGC GCCACCCACG TTCTCCACTC CGTCAGTGAC CTCGAGACCC TCCTACTTCC CACACACACC CCTGAGGAGT AA
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Protein sequence | MSARVGTTRL VCFDMAGTTV ADDGLVAQAF TRALDEVGST AIDRDAALRY VRDTMGESKI AVFRHLSGSD EAAARRLNGA FEREYALLVD AGLCAPIDGA EQLIAKLRAA GVRTALTTGF SRATADRILS ALGWRDLADL TLVPAEAGRG RPYPDLVLTA LLRLGVDDVR HVTTVGDTAS DVLAGRRAGA AIVAGVLTGA HDAATLRDAG ATHVLHSVSD LETLLLPTHT PEE
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