| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2552 |
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| Symbol | |
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| ID | 5706406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 2905350 |
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| End bp | 2906681 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641272015 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001537385 |
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| Protein GI | 159038132 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000382941 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGAAGTT CCAGGGCGCT GCTGGCGGCG CTGCTCTCGA CAGTGCTGTT CGCCACCGGC
TGCGGATCCG GGCTCGGGGC CGCGTCCGAC GGCACGGGGC CGGTGCGACT GTTGGTCTTC
GGCGCACCCG AGGAGTTGGC CGCGTACCGC ACGCTGATCG AGGCGTACGG TCAGGCACGG
CCCGGGAACG AGGTGCAGCT CATCGAGGCG AGCGACCGCA AGGACCTGCT GGCCCGGCTG
GCCACGTCGG TCGCCGGGGG CGCCCCGCCG GACCTGTTCC TGATGAACTA TCGCTTCTAC
GGCCAGTTCG CCGCGAAGAA CGTGGTCGAG CCGTTGGACG AGCGCATCGC CGCGTCCGAG
AAAGTGGATC CCGACGACTA CTACCCGGTG GCGATGAACG CCTTCACCTG GGGCGGCAAA
CAGCTCTGCC TGCCACAGAA CGTGTCCAGT CTCGCCGTCT ACTACAACCG CACCCTGTTC
GCCAAGTACC AGGTCCCCGA GCCGAAGGCC GGCTGGACCT GGAACGACAT GGTCGGTACC
GCCATCGCCA TGACCCGGGA CGCCCGCGGT GTGGTGGTCA AGGGCACCGA GAGCGAGGGC
GCCGCCGTCC GGCCAGCCGT ACACGGGCTC GGCGTCGAGC CGTCGATCAT TCGCGTTGCC
CCGTTCGTGT GGTCCGCCGG CGGCGAGATC GTCGACGACC CGAACCGGCC GACCCGGCTC
ACCCTGGACA CCCCGGTCGG ACGGGAGGCA CTGAAGAACC TGGTCGACCT ACGGCAGGCG
TACGGCGTGG TGCCCACGGA CGAGGAGGTC GAGGCCGAGG ATGACGAGTC CCGCTTCGCC
AACGGCCGAC TCGCCATGCT GATGTCCTCG CGGCGCTCCA CCACCACCTT CCGCTCGATC
ACTGACTTCG AGTGGGACGT CGCCCCGCTG CCGGTCTACC AGGACCAGGT CGGGGTGCTG
CACTCGGACG CGTACTGCAT GACCCGGAGC GCGAAGCGTA AGGACGCGGC ATGGCGGTTC
CTGGAGTTCG CCATCTCCGC CGAAGGACAG CGGATCATCG CCGCCACCGG AAGGACGGTA
CCGTCGCACA TCGACGTCTC GCGCTCCTCG GTGTTCCTCG GCCCGTCCCA GCCGCCGCGC
AGCGCGACGG TCTTCCTCGA CACGATTCCC ACCCTCCGGA CACTGCCGAC CGTCTCCACC
TGGCCCGAAG TCGAGGATGT GACCGCCGGG ATCCTGGAGA ACGCGCTGTA CCGGGGCGAC
CGGTTGGACG ATGTCATCCG CGCCGTCGAT GAGCAGACCC GCCCGCTGTT CGCACGTGGT
GAGCACGGGT GA
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| Protein sequence | MRSSRALLAA LLSTVLFATG CGSGLGAASD GTGPVRLLVF GAPEELAAYR TLIEAYGQAR
PGNEVQLIEA SDRKDLLARL ATSVAGGAPP DLFLMNYRFY GQFAAKNVVE PLDERIAASE
KVDPDDYYPV AMNAFTWGGK QLCLPQNVSS LAVYYNRTLF AKYQVPEPKA GWTWNDMVGT
AIAMTRDARG VVVKGTESEG AAVRPAVHGL GVEPSIIRVA PFVWSAGGEI VDDPNRPTRL
TLDTPVGREA LKNLVDLRQA YGVVPTDEEV EAEDDESRFA NGRLAMLMSS RRSTTTFRSI
TDFEWDVAPL PVYQDQVGVL HSDAYCMTRS AKRKDAAWRF LEFAISAEGQ RIIAATGRTV
PSHIDVSRSS VFLGPSQPPR SATVFLDTIP TLRTLPTVST WPEVEDVTAG ILENALYRGD
RLDDVIRAVD EQTRPLFARG EHG
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