| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2544 |
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| Symbol | |
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| ID | 5706398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 2897358 |
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| End bp | 2898299 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641272007 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001537377 |
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| Protein GI | 159038124 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.638785 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000422955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGCGTAGGT TCGACTTCAG CGCGGCGACC GCCGTGGTCA CCGGCGCTGC CAGCGGTATC
GGCGCAGCCC TCGCCCATGG CCTGGCCGCC CGCGGTAGCG ACCTGGTCCT GCTCGATCGC
GACGCCGCGC GCCTGGCCAC CGTCGCGGAC GCGATCCGTG CTGGGCACCC CGATCGGCGC
GTCGATCGGG TCGTCGTTGA CCTTGCCGAC GCGGCGGCCA CAGCTCGGGC CGCCGCGCAG
GTTCGCGCCC GCCATCCGCG GATCCGGCTG CTGGTCAACA ACGCAGGCGT GGCCTTGGGC
GGTCGGTTCG ACCAGGTGAC CCTGGACGAG TTCCAGTGGG TGGTCGAAAT CAACTTCCGG
GCGGTCGTGC AGCTCACGCA CGCGTTGCTG CCTGCCCTGA AGGCAGAGCC CGGTTCCCAC
CTGGTGAACG TCTCCAGCGT GTTTGGGCTG ATCGCGCCGC CTGGGCAGGC CGCCTACTCG
GCGACCAAGT TCGCCGTCCG TGGCTTTACC GAGGCCCTGC GCCACGAACT GATCGCCGAT
GGTATCGGTG TCACGTCCGT GCACCCTGGG GGCATCGCCA CCCGGATCAC CGAGAACGCG
CGTATCGGCA GTGGTGTCCG TCGGGATGAC TACGAGGAGG GCCGGCGGAA GTTCGACCGT
CTGCTCAGCA TCCCACCTGC CCGGGCCGCC GGGGTCATCC TGCGTGGCGT GGAACGCCGC
CGGCCTCGCG TCCTTGTCGG CTGGTCGGCG AAGCTGCCCG ACCTGATGGC CCGGATCGCT
CCGGGATCGT CCGGGACGCT GCTACGGGCC GGGATCGGCC GGGGTACCGG TGCGCCGGTT
CGCCGGCTGA CCACCGTGGC CGCGCCCCCG GAGGAGGCCG TGCCCCCGGC GGTGGCGAAC
GACCGGCGCT CCGAGGGAGT GTCGACGGCG GACGAGGCAT GA
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| Protein sequence | MRRFDFSAAT AVVTGAASGI GAALAHGLAA RGSDLVLLDR DAARLATVAD AIRAGHPDRR
VDRVVVDLAD AAATARAAAQ VRARHPRIRL LVNNAGVALG GRFDQVTLDE FQWVVEINFR
AVVQLTHALL PALKAEPGSH LVNVSSVFGL IAPPGQAAYS ATKFAVRGFT EALRHELIAD
GIGVTSVHPG GIATRITENA RIGSGVRRDD YEEGRRKFDR LLSIPPARAA GVILRGVERR
RPRVLVGWSA KLPDLMARIA PGSSGTLLRA GIGRGTGAPV RRLTTVAAPP EEAVPPAVAN
DRRSEGVSTA DEA
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