Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2490 |
Symbol | |
ID | 5704693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2847787 |
End bp | 2848698 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641271954 |
Product | xylose isomerase domain-containing protein |
Protein accession | YP_001537324 |
Protein GI | 159038071 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.279776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.973607 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCCC AGGAGGGTCT GGACCACCGG ATCCGGGTAG GGTCGTGCCC GGACTCCTGG GGTGTGTGGT ACGCGGACGA TCCCCGGCAG GTCCCGTGGC CGCGCTTCCT CGACGAGGTG GCCCGAGCCG GCTACGAGTG GATCGAACTC GGCCCGTACG GGTATCTGCC GACCGACCCG ACCCGGCTCG CTGGCGAAAC CGCCGTCCGT GGCCTACGAG TCGCCGCGGC GACGGTCCGT TCGACCCTGC ACCGTGGCCG CACCGGCTGG CAGGAGACCT GGCCTCGGGT GGCGGCGACC GCGGCGCTCG TGCGGGCGGT GGGTGGATCA CACCTCGTCG TGGTGCCGGG CTACTGGCGC GACCCGTGGA CCGGCGCCTC CGTCGAGGAG CCCAACCTCA CGGTGGAGCA GTGGCGTGAC CTCACCGTGT TGACCAACCG GCTCACCCGG CAGGTCCTCG ACTCCTTCGG GTTGCGCGTC ACGGTTCATC CACACGCCCA CACCCACCTC AACGACGAGC AGTCCGTCGC CCGCTTCCTC GAGGCGACGG ATCCGGAGCT GGTCTCCCTC TGCCTGGACG TCGGGCACTA CGCCTTCGGT GGTGGAGACA GCGTGACCCT GCTCGAAACC TGCGGCGAGC GCGTCGGCTA CCTACAACTC AAGCAGGTGG ATCCGGCGAT CCTCGCCGAT GTCGTCGCCG AGGATGTGTC GTTCGCGGCC GCCGTGGACC GCGGGTTGTG GTGCGAGCCA CCGCACGGGT TCCCCTCGCT GGAGCAGGTC CTGGCCGCCG CGCGACGGCT CGACACCGAC ATGTTCGCCA TCGCCGAGCA GGACATGTAC CCGTGCCCCG TCGACAAGCC CTTCCCGATC GCCGAACGGA CCCGCCAACT CCTACGTTCC TATGGGGTGT GA
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Protein sequence | MSPQEGLDHR IRVGSCPDSW GVWYADDPRQ VPWPRFLDEV ARAGYEWIEL GPYGYLPTDP TRLAGETAVR GLRVAAATVR STLHRGRTGW QETWPRVAAT AALVRAVGGS HLVVVPGYWR DPWTGASVEE PNLTVEQWRD LTVLTNRLTR QVLDSFGLRV TVHPHAHTHL NDEQSVARFL EATDPELVSL CLDVGHYAFG GGDSVTLLET CGERVGYLQL KQVDPAILAD VVAEDVSFAA AVDRGLWCEP PHGFPSLEQV LAAARRLDTD MFAIAEQDMY PCPVDKPFPI AERTRQLLRS YGV
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