| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2450 |
|---|
| Symbol | |
|---|
| ID | 5707695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 2810447 |
|---|
| End bp | 2811061 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641271917 |
|---|
| Product | UbiC transcription regulator-associated domain-containing protein |
|---|
| Protein accession | YP_001537288 |
|---|
| Protein GI | 159038035 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2188] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.501788 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGGTACG CAACGGTCCG CCCACGCCGG CCTCGGGGAA ACCTGGTGAA ACGGAACGCC
GCCGCCGGGT ACTCCTTTCC TTCGGCTACC AGCCGGGAGG CATGGAAGCA TCACGTTCCG
CCGAAGGCGG CTGTCGAGCC CCTCACCGAT GCGCGCCTTG CCAGGCTGCT CAAGGTTGAG
CCAGGCACCC GGGTAATGCG CCGTTTCCGG GTCACTGGTC CCGAGGCGGA GCCGCCGTTC
CAGATCAGTG TCTCCTGGGT CCATCCTCGC GCGGCGAGGG TGCCCGGGCT GGCCACCTGC
ACCTCGGGAC CTGGGGAGTG GCTGCACCAG TTGGAGAAGG CCGGCCACTG GCCCATCAGC
TGGATGGAGA TTCACCGGGC GCGGATGCCC AGCGCGCAGG AGGCTGCTCT GCTGGAGATC
CCGACGAGAC TTCCGGTACT GGAGATCGTT CGTGTGGGTG TCTCAGGTGA CGACGGTGAA
CCGGTCGAGG TGACCGAGTG CGTCGTTGCC AGTGACCGTG TCGAGACCAT TCACATCCTG
CACCGCGATG AGTCAGCGCA GGCGCCGTGG CCCGAGGCGG TTCACGTACC AGCGGAGGAT
GACCCGACAC AGTGA
|
|---|
| Protein sequence | MRYATVRPRR PRGNLVKRNA AAGYSFPSAT SREAWKHHVP PKAAVEPLTD ARLARLLKVE
PGTRVMRRFR VTGPEAEPPF QISVSWVHPR AARVPGLATC TSGPGEWLHQ LEKAGHWPIS
WMEIHRARMP SAQEAALLEI PTRLPVLEIV RVGVSGDDGE PVEVTECVVA SDRVETIHIL
HRDESAQAPW PEAVHVPAED DPTQ
|
|---|
| |