| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2416 |
|---|
| Symbol | |
|---|
| ID | 5706831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 2780691 |
|---|
| End bp | 2781926 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641271892 |
|---|
| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
|---|
| Protein accession | YP_001537263 |
|---|
| Protein GI | 159038010 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.758876 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.129808 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCACCA GCGTGATGCT GGTGGCCACG GTCACTGTCG TACCTGTATC CGCGGCGGCG
TTGCCCGGTC CGTCTCCCGG GCTGACCGAC GGTGGACCCC ATCGCGCCAA GCTGCGCACC
GCGCTCTCCG CTGTGCCCGA GGCCGGCGCC CCGGGCGTGC TGGCCGCCGT GCGCCACGGT
CGGCATGTTT GGCGTGACGG CGCCGGCCAG GCGTTTCTGA CCAGACCCCA ACCGATGCAG
CCACAGATGC GGCACCGCAT TGGCAGCATT ACCAAGACGT TTGTCGCCAC TACCGTGTTG
CAGCTCGTCG ACGAGGGCCG GCTGGGCCTC GACGACTCGA TCGGGCAGGT GCTGGCGGAC
GTCGTGCCGG GCGAACGTGG CACGGACGTC ACCGTCAGGA TGCTGCTGAA CCACACCAGT
GGCATCGGCA ACTACACCAC CGTGCTGGCT GACTCGTATG CGGCCATCAA CCAGATGCAG
GTCACCACGT ACGCCCCGGC GGACCTGGTT GCCATGGGTC TGGCGATGCC GCCGACGAAC
GTACCCGGCG CCAGCTTCAG CTACTCGAAC ACCAACTACG TCCTGGCCGG ACTGCTGATC
GAGGCGATCA CCGGCAACGA CGCGGCGGCG GAGGTGCAGC GGCGGATCCT GTGGCCGCTG
AGGCTCACCG GGACATCCTT CCCGGGTACC GATCCGACCA TTCGTGGCCC ACATAGTGGC
GCCTACTTTG CCCCGTTCGG AGCTCGTGAC CTCAGCGAGT TCAACATGAG CTGGGCGTGG
ACAGCGGGTG AAATGATCGC CACTACGGCG GACCTGAACA CGTTCTTTCG GGCGCTGCTC
GGCGGTGAGC TACTCAGCGC TGCCGCCCTC GATGAGATGC TCACCGCAGT GCCGATGCTG
CCGGGGCTAC CCGAGGCCGG TGCATACGGA CTCGGCATCT ACTCGCTGCC CACTCCGTGC
GGAGAGTTCT GGGGCCACGA CGGTGTGGTG CTAGGTCACC TGATGATGTC AATGCATAGC
CGGGATGGCA ATCGTCAGGT GTCGTCTGGT ATCAATATCA GCCACTATCG GTTCCTCCTG
TCCGATCCAC ACCCGATCGA CATCGCCTGG CAAACCTTTC TGCTCACCGC GATGTGCCCG
GCCAGCGAAA CGAGTGGCAG CTCGACAGAG GCCGTGCCAC AGCTACCCAG CATGCCCCGG
ATGCCGGGCG ACGACACATC GATAGCGGTG CTCTAG
|
|---|
| Protein sequence | MATSVMLVAT VTVVPVSAAA LPGPSPGLTD GGPHRAKLRT ALSAVPEAGA PGVLAAVRHG
RHVWRDGAGQ AFLTRPQPMQ PQMRHRIGSI TKTFVATTVL QLVDEGRLGL DDSIGQVLAD
VVPGERGTDV TVRMLLNHTS GIGNYTTVLA DSYAAINQMQ VTTYAPADLV AMGLAMPPTN
VPGASFSYSN TNYVLAGLLI EAITGNDAAA EVQRRILWPL RLTGTSFPGT DPTIRGPHSG
AYFAPFGARD LSEFNMSWAW TAGEMIATTA DLNTFFRALL GGELLSAAAL DEMLTAVPML
PGLPEAGAYG LGIYSLPTPC GEFWGHDGVV LGHLMMSMHS RDGNRQVSSG INISHYRFLL
SDPHPIDIAW QTFLLTAMCP ASETSGSSTE AVPQLPSMPR MPGDDTSIAV L
|
|---|
| |