Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2395 |
Symbol | |
ID | 5703887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 2751550 |
End bp | 2752416 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641271873 |
Product | hypothetical protein |
Protein accession | YP_001537244 |
Protein GI | 159037991 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000810917 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | GTGGGCTTCC GATCGTCAGT GGCGACGGCC GTGCACCGGG TGCCACCACA CGCGTACTTC GTCGTCAGCG CGGTGTTCCA CTACCTCGGT CCGGCGTTCG CGGTACTGCT GTTCGTCCGC GTTGACGCGC TCGGCGTGGC GTGGCTGCGC ATCGCCGCCG CCGCATCGAT CTTCGCGCTG TGGCGGCGCC CCTGGCGGCT GTGGCAGCGC CTTGACCAGC ACACCCGTCG ACTGCTGGTG GGGTGGGCCG CGGTGTTGGC GGCGATGAAC AGCGTCTTCT ATCTGGCTCT GGAACGGCTG CCGCTCGGCA CGGTCGCCGC GATCGAGTTT CTGCCGGTCA TCGCTCTGGC GGCATTCGCG GCCAGAACGC GTCGAAACCT GCTCGCCCTG GTCTGTGCCG TCGCCGGGGT CTACCTGCTC ACCGACGTCC GCCTGGTCGC CGAACCGCTC GGCATCGCCT TCGCCGCCGC CAACGCGGTG CTGTTCGCCG CCTACATTGT GCTCGGGCAC CGTGTTGCCC ACAGTCGGCA CCTGCACGGC ATCGACGGCC TCGCGCTGTC CATGCTGCTG GCCGCTGTCA TAGCCCTGCC GATCGGCATC TGGGACGCCG CGCCCGCCGT CGTCGACGTG GTCGCCCTGG CTGCCGGGGT GGGCATCGGT GTCTCGTCGT CGGTCATCCC GTACGTCACC GACCAACTCG CCATGGCCCG ACTGCCCCGG GCCACCTACG CGCTGCTGGT CTGCCTGCTC CCGGCTACCG CGACTGTTGT CGGCATCATC GTGCTGGCCC AGGTCCCCAC CGCCCCGGAG GTTGTCGGGG TCGTCCTCGT GGTCGCCGGG GTCGCCGTCC ATCAGGCCCG GTCGTAG
|
Protein sequence | MGFRSSVATA VHRVPPHAYF VVSAVFHYLG PAFAVLLFVR VDALGVAWLR IAAAASIFAL WRRPWRLWQR LDQHTRRLLV GWAAVLAAMN SVFYLALERL PLGTVAAIEF LPVIALAAFA ARTRRNLLAL VCAVAGVYLL TDVRLVAEPL GIAFAAANAV LFAAYIVLGH RVAHSRHLHG IDGLALSMLL AAVIALPIGI WDAAPAVVDV VALAAGVGIG VSSSVIPYVT DQLAMARLPR ATYALLVCLL PATATVVGII VLAQVPTAPE VVGVVLVVAG VAVHQARS
|
| |