| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2329 |
|---|
| Symbol | |
|---|
| ID | 5704253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 2678543 |
|---|
| End bp | 2680054 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641271807 |
|---|
| Product | amine oxidase |
|---|
| Protein accession | YP_001537178 |
|---|
| Protein GI | 159037925 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1231] Monoamine oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0980631 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00114882 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGCCT TGCGAAACAG TGGCGGGTCA GAATCCGCCA TCAATGGGCA GAAGCGGGTC
ACTGTGATCG GCGCGGGCAT CGCCGGGCTG GTGACGGCTT ACGAGCTGGA ACGTCTCGGA
CACCGTGTCG AGATCATCGA GGCGAGCCCG GATGTCGGTG GCCGAATCGA CACGCACCGG
TTCGCCGTCG ACGGCCGGCC CGGTCCCTTC GCCGAACTCG GTGCGATGCG GATCCCCGCA
GGGCATAGGC TGACCAGGCA CTACATCGCC GAGCTCGGTC TCCAGGACCA GGTTCATCGG
TTTCAGACGC TCTTCTCCGA TGACCACGCC TACCTGCCCA GTTCAGGTGG ATACGTCCGG
GTCGGTGACG CGCACGAAAC GCTGGTCAAG GAGTTTGTCG CTGGGCTGCC GAACCGGCAG
TACCGGGAGA ACACCCTGCT CTTTGGTGCC TGGCTGGATG CCACCATCAG GGCTGTCGCT
CCGCGTCAGT TCTACGACGG AATGCACAAC GAGATCGGTG CGGAGCTCCT CGACCTCATC
GATGGCATCG ATCTGACACC GTACCGGTGC GGGAGCTCGG GCAACCGGAT CGACCTGCAC
GCCTTCTACG CTGACCACCC GTTGATCCGG TCGCTCTGCC CGCCGCACCT GGAACGGTTC
CTCGACGACG TACTCGACGA GACCGGTTCC AACATCATCC GACTACGATC CGGGATGGAC
ATGTTGCCGC GGCGGCTCGC CGCCCAGATC CGCGGACCGA TCTCGACCGG CCGCGAGGTG
GTGGGCATCG AGATCCAGCA GGACTCTGTG CTCCTCCACG TCCGGCACGG TGCGAAGACC
ATCGCGACGA GCTGCGACTA TGTGGTGTGC ACCATTCCGT TCACGGTGCT TAGGGCAATG
CGGTTGGTGG GATTCGACCA GGACAAGCTC GACATCGTCC ACCAGACGAA GTACTGGCCG
GCGACAAAGG TCGCCCTGCA CTGCCGTGAA GCGTTCTGGA AGAAGGACGG GATCAGCGGT
GGTGCCTCCT TCACCGGCCA GCACGTACGG CAGACCTACT ACCCGCCCGT CGACGGTGAT
CCGGCACTCG GGGCCGTACT GCTCGCGAGC TACAGCATCG GGCCCGACGC GGAGGCACTC
GGCCGCCTGA GCGAGGCGGA GCGAAATGCG CTGATCATCA GGGAACTGAG CGAGATGCAC
CCCGAACTGC GTGCACCCGG CATGATCCTC GGCGTGGCGA GTCGGGCCTG GGGCCGGCAC
CGGTGGTCGC TCGGGGCCGC CACCGTTCGA TGGGGACAGG GGGCCGCACT CCGCGAATCG
GAGCGGCGAG AGGCGGTGCG GCCGCAGCGG CGACTGTTCT TCGCGGGTGA ACACTGTTCG
TCGAAGCCCG CCTGGATCGA GGGTGCGATC GAATCGGCCA TCGATGCCGC CCACGAGATC
GAATGGCATG AGCTCCGAGC CGACCGTGAG TTCGCCACCA CCCGGTCGAG CCGCCTGGGG
AAACTGGCAT GA
|
|---|
| Protein sequence | MAALRNSGGS ESAINGQKRV TVIGAGIAGL VTAYELERLG HRVEIIEASP DVGGRIDTHR
FAVDGRPGPF AELGAMRIPA GHRLTRHYIA ELGLQDQVHR FQTLFSDDHA YLPSSGGYVR
VGDAHETLVK EFVAGLPNRQ YRENTLLFGA WLDATIRAVA PRQFYDGMHN EIGAELLDLI
DGIDLTPYRC GSSGNRIDLH AFYADHPLIR SLCPPHLERF LDDVLDETGS NIIRLRSGMD
MLPRRLAAQI RGPISTGREV VGIEIQQDSV LLHVRHGAKT IATSCDYVVC TIPFTVLRAM
RLVGFDQDKL DIVHQTKYWP ATKVALHCRE AFWKKDGISG GASFTGQHVR QTYYPPVDGD
PALGAVLLAS YSIGPDAEAL GRLSEAERNA LIIRELSEMH PELRAPGMIL GVASRAWGRH
RWSLGAATVR WGQGAALRES ERREAVRPQR RLFFAGEHCS SKPAWIEGAI ESAIDAAHEI
EWHELRADRE FATTRSSRLG KLA
|
|---|
| |