Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2134 |
Symbol | |
ID | 5707260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 2454739 |
End bp | 2455356 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641271619 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001536990 |
Protein GI | 159037737 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.269562 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.11419 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAGAG TCTCCGAGGA CCACCGCGCC GCCCGTCGAC AGCAGATCCT GGCCGCTGCC GCCACCCGGT TCGCCCGCGA CGGCTTCCAC CGCACCTCCA TGCAGGACGT GGTCGACGAG TCCGGCATGT CGTTCGGCGC CGTCTACCGC TACTTCCGCA CCAAGAACGA CATCGTCATG GCGATCTCCC TGGAGGCGAT CAGCATGATC GAAACGGTGG TTCGCGACGG CGTCCAGGCC GGCCACCCCG TCGCCGACCT GATGGCCACG CTCCCCCGCG CGCTGCTCAC CCTCGAACAG ATCGACGAAC GAATGCGGCT CGCGGTGCAG GCGTGGGGAG AGGCCCTCCG CGATCAGGCC CTCGCCGAAC GCATGCAGTC GGGCCTGCGG CGGGCCCGCG CCGCACTGAA GGAGACCATC GACGTCAGTT GCGCCGACAG CGACGTCCAC ATCGACGCGG AGGCCGCATC ACAGGTCCTG ATCTCGATCA TTCAAGGCTT CATCCTGCAA CGCGCCTGGG ATCCCCACCT TGACGCCGAC TCGTACGGTC AGGCCGCGCA GGCGCTGATC GCCGGCGCTC TCGACCGCAC CGTGTCCGAT CAGCCGACAC CGAGGTGA
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Protein sequence | MPRVSEDHRA ARRQQILAAA ATRFARDGFH RTSMQDVVDE SGMSFGAVYR YFRTKNDIVM AISLEAISMI ETVVRDGVQA GHPVADLMAT LPRALLTLEQ IDERMRLAVQ AWGEALRDQA LAERMQSGLR RARAALKETI DVSCADSDVH IDAEAASQVL ISIIQGFILQ RAWDPHLDAD SYGQAAQALI AGALDRTVSD QPTPR
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