Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2113 |
Symbol | |
ID | 5704967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 2434412 |
End bp | 2435941 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641271598 |
Product | major facilitator transporter |
Protein accession | YP_001536969 |
Protein GI | 159037716 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.117023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00370364 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACGAGCC TCGGTGCGCC GGCCCGGGCG GGGCGGCGGG AGTGGACCGG GCTGGCCGTG CTGTGCCTGC CCACCATGCT CTCCCAGGTG GACATCAACG TGCTGATCCT CGCCCTGCCG CAGTTGACTG CCGATCTGGG GACCAGCGCG ACCCAGCAAC TCTGGGTCAC CGACATCTAC GGCTTCATGA TTGCCGGCTT CCTGCTCACG ATGGGAACGC TCGGCGATCG GGTCGGCCAC CGTCGGGTGC TGATGGCCGG CGCGGTCGGG TTCATCGCCG CGTCCCTGCT GGCGGCGTAC TCGTCATCCA CGGAGATGCT GCTGGTGGCG CGGGCCCTGC TGGGCATCGC CGCGGCGACG GTCATGCCGT CGGTGCTGGC ACTGATCCGG CGGATGTTCC AGGACCCCAA ACAGCTCGGC GCCGCGTTCG GGATCTGGGG CTCCTCGATC ATGCTGGGTG TGATGTTCGG CCCGGCGATC GGCGGTCTGC TACTGAACTC GTTCTGGTGG GGCTCGGTAT TCCTGCTGGG TGTCCCGGTG ATGCTCCTGT TGCTGGCGGT GGGCCCGGCG CTGCTGCCAG AGTCGCGCAC CGCACACGCC AGCCGGTTGG ACCTCGTCAG CGTGTTGCTG TCGCTGGCCG CCGTGCTGCC GGTCGTCTGG GGGCTGAAGG AGTTCGCGCG AGCCGGCTGG GGACCGGAAC CGGTCCTGGC CGTCATCGTC GGTGTCACGC TCGCCGCGCT GTTCGTGACC CGTCAGCGCC GGCTCACCGA ACCGCTGCTG GACCTGGAGT TGTTCCGCAA CAAGGTGTTC ACCACGGTGG TGGTCACCGG GCTGGCCATC GGAGCGGTGA TGGCCGGCAC CGGGCTCGTG GTGACGCTGT ACCTCCAACT CGTGGTGGGC CTCAGCCCGC TGGAGGTCGG CCTGTGGCTG CTGGTCCCGT CCTTTGCCAT GATCGTCGGC AGCAACGTGG GCCCAGCCGT CGCCCGGGCC GTTCGGCCCG CGTACGTGAT CGGCACCGGC CTGTTCGTCG CTGCGGCCGG CATGCTGCTG CTCTCCCAGG TGGATCCCGG CGCAACCCTC ACCTTGCTGA TCGTCGGTCT GGTTTTGGTC TTCACCGGAA ACAGCCCCAC CGGTACTCTC GGCAGCTTCC TGCTGATGTC TTCGACACCG CCGCACCGGG CCGGCGTCGC CGGATCGATC TCGTCGGCCG GCGGTGAGCT GGGCATCGCC CTGGGGATCG CGCTCATGGG TAGCGTCGCC ACCGCCAACT ACCGCAATGA CGTGGCCCTA CCGGCGGGGT TGCCGGGTGA GGCTGCCGAC CAGGCCCGAG GGAGCATCGC CGGCGCCGCG TCGGCCGCGA ACGGCCTGCC CACGCCGGTG GCCACCGAGG TCCTCAACGC CGCTCGGGCC GCGTTCACCG ACTCGCTGCA CACCGTCAGC CTCGTCAACG CGGTGCTCTT CCTCGCCGTG GCCACCCTCG TCCTGGTCAC GCTCCGGCAC GCGCCAGCGA TGGGCGCAGC GAAACGCTGA
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Protein sequence | MTSLGAPARA GRREWTGLAV LCLPTMLSQV DINVLILALP QLTADLGTSA TQQLWVTDIY GFMIAGFLLT MGTLGDRVGH RRVLMAGAVG FIAASLLAAY SSSTEMLLVA RALLGIAAAT VMPSVLALIR RMFQDPKQLG AAFGIWGSSI MLGVMFGPAI GGLLLNSFWW GSVFLLGVPV MLLLLAVGPA LLPESRTAHA SRLDLVSVLL SLAAVLPVVW GLKEFARAGW GPEPVLAVIV GVTLAALFVT RQRRLTEPLL DLELFRNKVF TTVVVTGLAI GAVMAGTGLV VTLYLQLVVG LSPLEVGLWL LVPSFAMIVG SNVGPAVARA VRPAYVIGTG LFVAAAGMLL LSQVDPGATL TLLIVGLVLV FTGNSPTGTL GSFLLMSSTP PHRAGVAGSI SSAGGELGIA LGIALMGSVA TANYRNDVAL PAGLPGEAAD QARGSIAGAA SAANGLPTPV ATEVLNAARA AFTDSLHTVS LVNAVLFLAV ATLVLVTLRH APAMGAAKR
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