| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2007 |
|---|
| Symbol | |
|---|
| ID | 5707503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 2303143 |
|---|
| End bp | 2303772 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641271503 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001536874 |
|---|
| Protein GI | 159037621 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000443112 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGTCTGTTC CCGTCCGTCA GATCCGCGCC CGATACTCGG CCGACACCAT CACCGTGTAT
CAGGCGTATC CCCCGCAGAT TGCGCTGCCA GCGGTGGCAG CCAGCCGTTT CGTGGCTCCC
TTCAAGCGGG ACCGGATGAC GTGGATCAAG CCGTCGTTCC TGTGGATGAT GTACCGCTGC
GGCTGGGCTA CGAAGCCAGG GCAAGAGCGC GTGCTGTCCA TCGACATTAC GCGTGAGGGA
TTCGAGTGGG CACTGGCGCG AGCCTGCCTG AGTCACTACG ACCGAGACCT GCACGGCGAC
AAGGCGACCT GGTTACGGCA ACTGAAAATC AGCCCCGTCC GAGTGCAGTG GGATCCGGAA
CGATCGCTGC AGCTGAAGGC GCTGCCGTAC CGGTCGCTGC AGGTTGGATT GTCCGGCGAG
GCTGTCGACC GGTACGTCGA CGACTGGGCC GTTGCCATCA CCGACATCAC CCCCACCGTG
CACCTGGTCC GGGACCTTCT GCGTAGCGGC GACGGACAGG CGGCAGCAGC TCTACTACCT
GTCGAGCAGG TCTACCCGCT GCCAGATCAG ATCGCCGTCG GCCTCAACGC CAGCCCGCAC
CTCACCACCG GCAAAGCGCC CGGTCGGTAG
|
|---|
| Protein sequence | MSVPVRQIRA RYSADTITVY QAYPPQIALP AVAASRFVAP FKRDRMTWIK PSFLWMMYRC
GWATKPGQER VLSIDITREG FEWALARACL SHYDRDLHGD KATWLRQLKI SPVRVQWDPE
RSLQLKALPY RSLQVGLSGE AVDRYVDDWA VAITDITPTV HLVRDLLRSG DGQAAAALLP
VEQVYPLPDQ IAVGLNASPH LTTGKAPGR
|
|---|
| |