| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1915 |
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| Symbol | xerD |
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| ID | 5708267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 2211135 |
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| End bp | 2212172 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 641271419 |
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| Product | site-specific tyrosine recombinase XerD |
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| Protein accession | YP_001536791 |
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| Protein GI | 159037538 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.279776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00138491 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTGCGGTC AGGCCCATCA CCACCACGGG TGCGACGTCG GCACCGGGAA CGCCTACCAG
CGCGGCGAAG GCGATCACCG CGCTCCCGTG CCGGCCCTGC AGCACGCCGT CCGCGGCTAC
CTGGACCACC TCGCCGTCGA ACGGGGACTC GCCGCGAACA CGCTCGCCTC GTACCGCCGG
GACCTGGGCC GCTACCTCGA CACCCTCGCC TCGGTCGGGG TGACCGAGCT GGCGTCGGTC
GACCCGGGTC AGGTCGAGGT CCACCTGGCC CGGTTGCGCG CCGGTGACGA CGGGCACCCA
CCGCTCGCGG CGTCCTCCGC GGCCCGCGCC GCCAGCGCCG TGCGCGGCCT GCACCGCTTC
GCGCTGCGCG AGGGCCTGGC CGGCGTGGAC CCGAGCCGCG ACCTCCGCCC AGCCGCGCCA
CCCCGCCGGC TGCCCCGCGC CCTGCCCGTG GACGATGTTC TCAAGCTCCT GGAAGCCGCT
GGATCGGTCG CCGCCACCGG TGACGGCGCG CCGCTCGCGC TGCGTGACCG GGCACTGCTG
GAGTTCCTGT ACGGCACGGG AGCCCGGATC TCCGAAGCGG TCGGCGTCGC CGTTGACGAC
CTTGACACCG ACACGGGCGC GGTGCTGCTG CGCGGCAAGG GCGGCCGGAA CCGGCTCGTC
CCGATCGGTG GGTACGCCGT GGCGGCGCTG CGCGGGTATC TGGTGCGCGC CCGCCCCGGC
CTCGCCGCCG CTGGCCGAGG CACACCGGCG GTCTTCCTCA ACGCACGGGG CGGCCCGCTG
TCCCGCCAGG GCGCCTGGGC CATCCTGCGC GGTGCCGCCC GACGGGCCGG CCTACCGGGT
GTGGGGGCGG AAGCGGTATC CCCACACACG CTGCGCCACT CCTACGCCAC CCACCTGCTC
GACGGCGGCG CCGACGTGCG TGTGGTGCAG GAACTGCTCG GCCACGCCTC GGTCACCACC
ACCCAGGTCT ACACGATGGT CACCGTGCAA CGGCTGCGTG AGGTGTACGC CACCGCCCAC
CCGCGGGCGC TCGGCTGA
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| Protein sequence | MCGQAHHHHG CDVGTGNAYQ RGEGDHRAPV PALQHAVRGY LDHLAVERGL AANTLASYRR
DLGRYLDTLA SVGVTELASV DPGQVEVHLA RLRAGDDGHP PLAASSAARA ASAVRGLHRF
ALREGLAGVD PSRDLRPAAP PRRLPRALPV DDVLKLLEAA GSVAATGDGA PLALRDRALL
EFLYGTGARI SEAVGVAVDD LDTDTGAVLL RGKGGRNRLV PIGGYAVAAL RGYLVRARPG
LAAAGRGTPA VFLNARGGPL SRQGAWAILR GAARRAGLPG VGAEAVSPHT LRHSYATHLL
DGGADVRVVQ ELLGHASVTT TQVYTMVTVQ RLREVYATAH PRALG
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