Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1897 |
Symbol | |
ID | 5705942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2191414 |
End bp | 2192274 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641271401 |
Product | tetratricopeptide TPR_4 |
Protein accession | YP_001536773 |
Protein GI | 159037520 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000220066 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | TTGGTCGCGA TCGGCCAGCT GATCGATGAG GACCCGACCG AGGCGCTGGC ACATGCCCTC GCAGCCCGTC GGCTCGCTGC TCGTATCGCT GCCGTTCGTG AGGCGGTGGG CCTGGCCGCT TACCACGCCG GCGAGTGGCA GACGGCGGTA GCCGAGTTGC GGACGTACCA CCGGATGACC GGCCTGCAGA GCCACTTGGC GGTGCTGGCC GACTGCGAGC GGGCGCTCGG TCGCCCCGAG CGGGCGATCG ATCTGTTCCG GGGCGCGGAT CGGGAGAAGT TGGACCGCGC GGTCGCTGTG GAGCTGCTGA TCGTCGCTGC GGGAGCGCGG GGTGACCTGG GACAGAAGGA CGCGGCTGTG GCGATGCTGC AGGTGCCGGA ACTGACCGGC GACGCGCCGG AGCCGTGGAC GATCCGACTG CGGTACGCGT ACGCCGACGC TTTGCTCGCG GGCGGCCGGC GCGAGGAGGC CCGGGAGTGG TTCTCTCGCG CTGCGGAGCT AGACGTCGAG GGAGAGACCG ACGCGGCCGA GCGTCTGTTG GAGCTCGACG GTGTGATGAT CGAGGGCGAC GACGCGGACG AGGTCGAGGA CGAGGTCGAG GACTTCACCG CGGGCCCTGG TGCCCCCGGC GCTGTTTCGG TGCGGCCCGA TACCGAACTC GTTGACGAGG ACTCGCTCGA CGGTGCCGAT GCTGAGTCTG AACGAGACGG CGCCAACGAC GGCGCGGATG GCGCCCGGGC CGACAGTGGT CTCCCGACGT CGGAGGCTGG TGACAGCGAC CCGACCGACG CCAAGGCGCA GCGGCCCGCT GGCGAGTCCG GGGACGCGGT GGACGGAGAC CAGGCAGGTT CCCGTCGATG A
|
Protein sequence | MVAIGQLIDE DPTEALAHAL AARRLAARIA AVREAVGLAA YHAGEWQTAV AELRTYHRMT GLQSHLAVLA DCERALGRPE RAIDLFRGAD REKLDRAVAV ELLIVAAGAR GDLGQKDAAV AMLQVPELTG DAPEPWTIRL RYAYADALLA GGRREEAREW FSRAAELDVE GETDAAERLL ELDGVMIEGD DADEVEDEVE DFTAGPGAPG AVSVRPDTEL VDEDSLDGAD AESERDGAND GADGARADSG LPTSEAGDSD PTDAKAQRPA GESGDAVDGD QAGSRR
|
| |