Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1892 |
Symbol | |
ID | 5704194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 2179956 |
End bp | 2180840 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641271393 |
Product | UspA domain-containing protein |
Protein accession | YP_001536768 |
Protein GI | 159037515 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.281928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00296839 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGATCA AGGCCGGAGC CCCAGTCGTG GTGGGAGTGG ACGGTTCCGC TGCCGCGCTG GACGCGGTCC GGGTAGCGGT GCGGGAGGCG GAGTACCGGC AGCGCCCACT ACGGGTGGTG CACGCCTTCA TCTGGCCGTT GACCGGTGCC CCGTTGACCC CGGTTCCCGG TGCCCCGGTC ACGGCCGGAC TGCGCAACCA GGCCGAGCAG TACGTGACGG AGGCCGTCGA GCAGGCCCGC AAGATCGCCC CTGATCTGCG GATCACCGGC GTCGTGGTGG ATGGCGCACC GACCCCGGTG CTGGTCGAGG AGGCGCGAGG GGCGGTACTG ACGGTGCTTG GCCACCGAGG GCTGGGCGGC TTCGCCGGTC TGCTGCTCGG GTCGGTCACC GTGCAGGTCG CTGCCCGGGC GCAGAGCCCG GTCATGGTGG TCCGGGGTGA GGCACGCGCC GACGGTCCGG TCGTGGTGGG AGTGGACGGT TCCGAGCTGT CCACCAAGGC GGTCGCCTTC GCGTTCGAGG AGGCGGACCG TCGGGACGCT TCGCTGGTAG CGGTGCACGC CTGGCTTTTC CCGACTCCTG TCGGCCCCGG GGACATCCTG CCCCTGGTCT ATGACCTGGA TGCCGCCGAG GGTGAGGAGG AGCGGACCCT CGCCGAGTCG ATCGCCGGTT TCGCCGACAG GTATCCGCAG GTGCCGGTGC GGCACCGAGT GGTGCGTGGC TCTCCGGGTC GGGTGCTGGT GGAGGCGTCG AAGCGTGCCC AGCTGGTGGT CGTCGGCGCG CACGGGCGCG GCGCGTTCGG CGGGCTGCTG CTCGGCTCGG TCAGCCACGC CGTCCTGCAT CACGGACACA GTCCCCTGGT CATCGTCCGG CACGGCGACG GGTGA
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Protein sequence | MTIKAGAPVV VGVDGSAAAL DAVRVAVREA EYRQRPLRVV HAFIWPLTGA PLTPVPGAPV TAGLRNQAEQ YVTEAVEQAR KIAPDLRITG VVVDGAPTPV LVEEARGAVL TVLGHRGLGG FAGLLLGSVT VQVAARAQSP VMVVRGEARA DGPVVVGVDG SELSTKAVAF AFEEADRRDA SLVAVHAWLF PTPVGPGDIL PLVYDLDAAE GEEERTLAES IAGFADRYPQ VPVRHRVVRG SPGRVLVEAS KRAQLVVVGA HGRGAFGGLL LGSVSHAVLH HGHSPLVIVR HGDG
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