| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1866 |
|---|
| Symbol | |
|---|
| ID | 5704824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 2153012 |
|---|
| End bp | 2153992 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641271367 |
|---|
| Product | response regulator receiver modulated diguanylate cyclase |
|---|
| Protein accession | YP_001536742 |
|---|
| Protein GI | 159037489 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGTCCG CCGGAGACCG CCAGGACGTC ATCCTTGTCG TTGACGACGA CGAGGACATC
GCACGGTTCG TCGAGTTCAA CCTGCGGCTG CACGGTTACG AGGTGATCCA CGCCAGGGAC
GGCCAGGAGG CGCTCGAGGT CATTGCGCAG CACCGCCCCG ACCTGGCCGT GGTCGATCTG
ATGATGCCCC GCGTCGACGG GTTGGAGTTG ACCCGCCGAC TGCGTGCCGA TCCGATGACC
GCGGCCCTGC CAGTGATCAT GCTTACCGCC AAGGGCATGA CCGTCGACAA GGTGCACGGC
CTCAGCGCCG GCGCCGACGA CTACCTGGTC AAGCCTTTCG ACACCGCCGA GTTGGTGGCC
CGGGTCAGCT CCACGTTGCG TCGCAACAAG GAGTTCCGCG AGGTCTCGCC GTTGACCGGG
CTACCCGGCA ACAGCCGGAT CCGCCGGGAG ATCGGCGACC GGATCCGGGT CGGATCCGAC
TACGCGGTCG GTTACATCGA CATCGACCGG TTCAAGAGTG TCAACGACGT CTACGGGTTC
GTTCGCGGCG ACGACTTCAT CACCGCGCTG GCCCGCAGTC TGCACCAGGC GGTCGTCTCG
GTGGGGCTCC CACCGGCCTT CCTCGGCCAC GTCGGCGGCG ACGACTTCAT CTTCGTCTGC
ACGCCCGAGC AGGTTCGTCC GCTGACCTCG CAGGTCTCGG CCGACTTCGA GCGGGCGGCC
GACGCGCTGT ACGACTCGTC CGACGCCGCC CGCGGCTACG TGGAGGTCAA GGACCGGCGT
GGAAACCTGC GCCGTGCCGC GCTGGTCACC CTCTCCATCG GCGTGTCGGT CTCGGACGCC
GACAAGCGTC TCACGAATCC GCTGGCGGCG ATGACGATCG CCTCCGAGAT GAAGTCGGTG
GCCAAGAGTC AGCCGGGGTC GTACGTGGCG GTGGACCGGC GCCGCGGAGT GTCGGATTCG
AGCCATCGTC CTGTGAAGTA G
|
|---|
| Protein sequence | MESAGDRQDV ILVVDDDEDI ARFVEFNLRL HGYEVIHARD GQEALEVIAQ HRPDLAVVDL
MMPRVDGLEL TRRLRADPMT AALPVIMLTA KGMTVDKVHG LSAGADDYLV KPFDTAELVA
RVSSTLRRNK EFREVSPLTG LPGNSRIRRE IGDRIRVGSD YAVGYIDIDR FKSVNDVYGF
VRGDDFITAL ARSLHQAVVS VGLPPAFLGH VGGDDFIFVC TPEQVRPLTS QVSADFERAA
DALYDSSDAA RGYVEVKDRR GNLRRAALVT LSIGVSVSDA DKRLTNPLAA MTIASEMKSV
AKSQPGSYVA VDRRRGVSDS SHRPVK
|
|---|
| |