| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1782 |
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| Symbol | |
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| ID | 5706593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 2053797 |
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| End bp | 2054489 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641271285 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001536660 |
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| Protein GI | 159037407 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0025253 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGCCG AGCCGGCGAC CAGCCGGGCC ATCCGGGTCC TGCTCGCCGA CGACCAGCAC
CTCGTGCGTA CCGGGTTCCG GGTCATCCTC GAGGTGGAAG ACGACATCCA CGTCGTCGGG
GAGGCCGCGG ACGGCGAGCG GGCGGTGAGC ATGGCCCGGG CGCTACGCCC AGACGTGGTC
CTGATGGATG TGGAGATGCC CCGGGTCGAC GGGCTGGAGG CCACCCGACG GATCGTCGCG
GACGTGGACC GACCGAACGG TCCGGCGGTG TTGATCCTCA CCACCTTCGA CCGGGATGAC
TATCTGTTCG CCGCGCTGCG CGCCGGAGCC AGCGGATTCC TGCTGAAAAA CGGCACGCCG
GAGGCGCTCG TGGCGGCGAT CCGGGTGGTC GCCCGAGGCG ATGGCCTCAT CGCCCCCGAG
CTCACCCGGC GAGTGATCGC CGCCTTCGCC GGGCCGGGAG GCGAACCAAC GACGACGGCC
GTGGCTCTGC CGGAGCTCAC GCCACGGGAG CACGAGGTAC TGGTGCTGGT CGCCTCGGGT
GCGAACAACG CCGAGATCGC AGCCGCCTTA CGCCTCGGCG AGGCGACCGT GAAGACCCAC
GTCAGTCGGG TGCTGGCCAA ACTCGGCCTG CGGGATCGAG TGCAGGCAGT GGTCTTCGCG
TACGAACACG GGGTGGTGCG GCCGGGCGGA TGA
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| Protein sequence | MTAEPATSRA IRVLLADDQH LVRTGFRVIL EVEDDIHVVG EAADGERAVS MARALRPDVV
LMDVEMPRVD GLEATRRIVA DVDRPNGPAV LILTTFDRDD YLFAALRAGA SGFLLKNGTP
EALVAAIRVV ARGDGLIAPE LTRRVIAAFA GPGGEPTTTA VALPELTPRE HEVLVLVASG
ANNAEIAAAL RLGEATVKTH VSRVLAKLGL RDRVQAVVFA YEHGVVRPGG
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