Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1779 |
Symbol | |
ID | 5704521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2050841 |
End bp | 2051590 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641271282 |
Product | hypothetical protein |
Protein accession | YP_001536657 |
Protein GI | 159037404 |
COG category | [S] Function unknown |
COG ID | [COG0217] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00242186 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCGGCC ACTCAAAGTG GGCGACGACC AAGCACAAGA AGGCGGTCAT CGACGCCAAG CGCGGCAAGA TGTTCGCCAA GCTGATCAAG AACGTCGAGG TCGCGGCGCG CACCGGCGGC GGTGACCCGG CTGGTAACCC GACGCTCTAC GACGCCATCC AGAAGGCCAA GAAGAACTCG GTCCCCAACG ACAACATCGA CCGTGCGGTC AAGCGTGGTT CTGGCCTGGA GGCCGGCGGA GCCGACTACC AGACGGTCAT GTACGAGGGC TACGGGCCGA ACGGTGTCGC GCTGTTGATC GAGTGCCTGA CCGACAACCG TAACCGTGCC GCCACCGAGG TACGGACCGC GCTGACCCGT AACGGCGGCT CGTTCGCCGA TGCCGGCTCG GTGTCGTACC TGTTCAGCCG CAAGGGTGTG GTGATCGTGG CCAAGGCCGG CACCACCGAG GACGATGTGA TGCTGGCCGT CCTGGACGCG GGGGCGGAGG AGGTCAACGA CCTGGGGGAG TCGTTCGAGG TGCTCTCCGA ACCGGGTGAT CTGGTAGCGG TGCGTACCGC GTTGCAGGAC GCCGGCATCG AGTACGAGTC GGCCGAGTCC TCGCTGGTCC CGAGCGTCAG CGTCCCGCTG GACGAGGACG GCGCCCGGAA GATCCTCAAG CTCATCGACG TGTTGGAGGA CAGCGACGAC GTGCAGAACG TCTACGCGAA CTTCGACGTC TCCGACGAGA TGCTCGCGCG ACTCGGCTGA
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Protein sequence | MSGHSKWATT KHKKAVIDAK RGKMFAKLIK NVEVAARTGG GDPAGNPTLY DAIQKAKKNS VPNDNIDRAV KRGSGLEAGG ADYQTVMYEG YGPNGVALLI ECLTDNRNRA ATEVRTALTR NGGSFADAGS VSYLFSRKGV VIVAKAGTTE DDVMLAVLDA GAEEVNDLGE SFEVLSEPGD LVAVRTALQD AGIEYESAES SLVPSVSVPL DEDGARKILK LIDVLEDSDD VQNVYANFDV SDEMLARLG
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