| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1772 |
|---|
| Symbol | |
|---|
| ID | 5704514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 2043010 |
|---|
| End bp | 2045163 |
|---|
| Gene Length | 2154 bp |
|---|
| Protein Length | 717 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641271275 |
|---|
| Product | elongation factor G |
|---|
| Protein accession | YP_001536650 |
|---|
| Protein GI | 159037397 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0480] Translation elongation factors (GTPases) |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.228015 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0328295 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGA AGAGTCAGGA CAAGGGGGTC GCCGGCGGGA TGCCGGTGGT GACCCACCCC
GACAAGATCC GCAACGTGGT GCTCGTCGGG CACTCCGGTG CCGGCAAGAC GACTCTGGTC
GAGGCGCTGC TGGCGGCGAC CGGCACGATC GGCCGCACCG GGAACGTCAC CGACGGCAGC
ACGACCTGCG ATCACGATCC GGCCGCCATC CGTCAACAGC GGTCGGTGAC CCTGGCCTGC
GCGCCGCTCA TGCACGACGG GATCAAGGTC AACCTGCTGG ACACCCCGGG ATACGCCGAC
TTCGTGGGCG AGTTGCGCGC CGGGTTGCGG GCCGCCGACG CCGCGCTGTT CGTCGTCTCC
GCCGTCGACG GGATGGACGC CACCACCGCC GCGCTGTGGG AGGAGTGCGC GGCCGTGGAC
GTGCCCCGGG CGGTCGCCGT CTCCCGGCTG GACCATCCAC GCGCGGACTT CGACGAGGCG
GTCGCGCTCT GCCAGCGGGT TTTCGGCGAC AACGTGCTTC CGCTCTACCT GCCGATGCTC
GGCGACGACG GCGTCTCCAC CGCCGGCCTG CTCGGCCTCA TCACCCGCCG CGTCCTCGAC
TACACCGCCG GGCTGCCAGC CGAGGTGCGG CAGCCGGACC CGGAGCACCT GCCGGCGATC
GCCGAGTCCC GCAACGAGCT GATCGAGGGC ATCATCGCCG AGAGCGAGGA CGAGACCCTC
ATGGACCGGT ACCTCGAGGG CGCCGAGATC GACACCGGAA TTCTCGTCGA GGATCTGGAG
AAGGCGGTCG CGCGCGGTCA CTTCTACCCC GTGGTACCGG TCTGCGCGCA GACCGGGGTG
GGAATCGACG CCCTGCTGGA GGTGCTCACC GCCGGCTTCC CGTCGCCGCT GGAGCATGAC
GTGCCGGCGG TGACCGGGGT GGACGGCGCA CCACGCCCGC CGCTGACCTG CGACCCGGCC
GGGCCGCTGG TCGCCGAGGT GGTCAAGACC ACTGTCGACC GACACGTGGG GCGGGTCTCC
CTGGTCCGGA TCTTTTCCGG CACGCTCCGC CCGGAGCAGG TCGTGCACGT GTCCGGGCAC
GGCCTGGCTG ACCGTGGCCA CCCCGACCAC GACGCCGACG AGCGGGTCGC CCACCTCTAC
TCGCCGCTCG GGGCGACGCT GCGCGAGGTG AGCATGTGTG TGGCCGGCGA CCTCTGCGCG
CTCACCAAAT CGGGCAGCGC GGAGACCGGC GACACCATCT CGGCCAAGGA CGATCCGCTG
CTGGTGGCGC CATGGGAGAT GCCGGAGCCG CTGCTGCCGG TGGCGATCGT GGCACGCACC
CGCGCCGACG AGGACGCGCT GGCCCGCAAC CTGGCCCGGC TGGTGGCCGG TGACCCCACC
CTGCGGCTCG ACCGCAACAG CGAGACCCGT CAACTGGTGC TCTGGTGCAT GGGTGAGGCG
CACGCGGACG TGGTGCTGGA CCGGTTGCGC AGCGGCGGGG TGGAGCTGGA CACGGCGCCG
GTGCGGGTGG CCCTGCGGGA GACGTTCACC GTGCCGGCCA AGGGGCACGG ACGGCACGTC
AAGCAGTCCG GTGGACACGG CCAGTACGCG GTCTGCGACA TCGAGGTGGA GCCGCTACCC
CGGGGCGACG GTTTCGAGTT CGTCAACCGG GTGGTGGGCG GGGCTGTACC GCACAACTAC
ATCCCCTCGG TGGAAAAGGG CGTGCGGGCC CAGTTGGAGC GTGGCCTGGC GGCCGGCGCC
CCCCTCGTGG ACCTGCGGGT GACGCTCGTC GACGGTAAGG CGCACAGTGT CGACTCCTCG
GACGCGGCGT TCCAGACCGC AGGGGCCCTG GCCCTCAGGG ACGCGGCCGA CAAGGGCCAG
CCGGCACTGC TGGAACCGGT CGACGAAGTG ATCATCCGGG TACCCGACTC GTCGGTCGGC
GCGGTGCTCG GTGACCTGTC CGGCCGACGC GGCCGGGTGC TCGGCACCGA ACCTGACACC
GCCGCCGAGG GGCGAACCCT GGTCCGCGCC GAGGTCCCGG CGACCGAACT TCTCCGGTAC
GCGGTGGAGT TACGGTCGAT GACCTCCGGC ACGGGCACCT TCGGCCGCGA GTTCGCCCGC
TACGAACCCA TGCCCAGCCA CCAGGCCGAC CGATTCCGCA CAGAGCACGC CTGA
|
|---|
| Protein sequence | MAQKSQDKGV AGGMPVVTHP DKIRNVVLVG HSGAGKTTLV EALLAATGTI GRTGNVTDGS
TTCDHDPAAI RQQRSVTLAC APLMHDGIKV NLLDTPGYAD FVGELRAGLR AADAALFVVS
AVDGMDATTA ALWEECAAVD VPRAVAVSRL DHPRADFDEA VALCQRVFGD NVLPLYLPML
GDDGVSTAGL LGLITRRVLD YTAGLPAEVR QPDPEHLPAI AESRNELIEG IIAESEDETL
MDRYLEGAEI DTGILVEDLE KAVARGHFYP VVPVCAQTGV GIDALLEVLT AGFPSPLEHD
VPAVTGVDGA PRPPLTCDPA GPLVAEVVKT TVDRHVGRVS LVRIFSGTLR PEQVVHVSGH
GLADRGHPDH DADERVAHLY SPLGATLREV SMCVAGDLCA LTKSGSAETG DTISAKDDPL
LVAPWEMPEP LLPVAIVART RADEDALARN LARLVAGDPT LRLDRNSETR QLVLWCMGEA
HADVVLDRLR SGGVELDTAP VRVALRETFT VPAKGHGRHV KQSGGHGQYA VCDIEVEPLP
RGDGFEFVNR VVGGAVPHNY IPSVEKGVRA QLERGLAAGA PLVDLRVTLV DGKAHSVDSS
DAAFQTAGAL ALRDAADKGQ PALLEPVDEV IIRVPDSSVG AVLGDLSGRR GRVLGTEPDT
AAEGRTLVRA EVPATELLRY AVELRSMTSG TGTFGREFAR YEPMPSHQAD RFRTEHA
|
|---|
| |