Gene Sare_1770 details

Gene Information

• Locus tag: Sare_1770
• Symbol: thrS
• ID: 5704512
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salinispora arenicola CNS-205
• Kingdom: Bacteria
• Replicon accession: NC_009953
• Strand: +
• Start bp: 2040267
• End bp: 2042282
• Gene Length: 2016 bp
• Protein Length: 671 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 641271273
• Product: threonyl-tRNA synthetase
• Protein accession: YP_001536648
• Protein GI: 159037395
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0365193
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 5
• Fosmid unclonability p-value: 0.000990893
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

GTGTCCGCAC CCCGTAACCC CGTCGTGGCC GACCCCGTCG TCGTGGCCGC CGGGACGACG 
GCGGCCGACG CGGTCGCGGC GGCCGGGCTT CCGGTGGCCG GTCGGGCCGC GGTCGTGGTG 
GTGCGGGATC CGCAGGGCCA GCTTCGCGAC CTGGACTGGA CCCCGGTGGA GGAGACCGTG 
GTCGAGCCGG TCGGCATCGA CACCCCGGAC GGGCTGGCCG TGCTGCGGCA CTCCACCGCC 
CACGTGCTCG CCCAGGCCGT GCAGGACCTC TTTCCCGAGG CGAAGCTGGG CATCGGCCCA 
CCGATCGAGA ATGGTTTCTA CTACGACTTC GCGGTCGACC GGCCGTTCCA GCCCGAGGAC 
CTGACAAAGC TGGAAAAGCG GATGCAGGAG ATCATCAAAT CCGGCCAGCG GTTCCGTCGC 
CGCCGCTTCC GCAACCTGGA CGAGGCGCGC GGTGAACTCG CGGCCGAGCC GTTCAAGCTG 
GAGCTGATCG AACTCAAGGG TGACGGGCTG GACTCCTCCC AGGTGATGGA GGTGGGTGGC 
GGCGAACTGA CCAGCTACGA CAACCTTGCC GCCGATGCGG ACAAGGTCTG CTGGTCGGAC 
CTGTGCCGCG GTCCCCACCT GCCGAACACC CGACTCATCG GGGCCTTCAA ACTGATGCGG 
TCGGCCGCCG CGTACTGGCG TGGTTCGGAG AAGAACCCAC AGCTCCAGCG GGTGTACGGC 
ACCGCCTGGC CGACCCGGGA CGAGTTGAAG GCGTACCTGC GGCTCCTGGA GGAGGCCGCC 
CGGCGCGACC ACCGCAAGCT CGGTACCGAC CTCGACCTGT TCAGCTTCCC GGAGGAGATC 
GGCTCAGGCC TGCCGGTGTT CCACCCCAAG GGCGGCGTGC TCAAGCGGAC GATGGAGGAC 
TACGTCCGTG CCCGGCACAT CGAGGAGGGC TTCGACTACG TCGGCACCCC GCACATCTCG 
AAGGAAGGGC TCTTCCACAC CTCGGGCCAC CTGCCGTACT ACGCCGACGG GATGTTCCCG 
CCCATGCACC TGGAGGGGGC GGACTACTAC CTCAAGGCGA TGAACTGCCC GATGCACAAC 
CTGATCTACC GGTCCCGCGG GCGGTCCTAC CGGGAACTGC CGATGCGGCT GTTCGAGTTC 
GGCTCGGTCT ACCGTGACGA GAAGTCCGGC GTCATCCATG GGCTGACCCG GGTGCGCGGT 
TTCACCCAGG ACGACTCGCA CTCCTACTGC ACCAAGGAGC AGGCGCCCGC CGAGATCAAG 
CATCTGCTGG CCTTCGTGCT CGGGCTCCTG CAGGACTTCG GGATCACCGA CTTCGTCCTC 
GAGTTGTCCA CCCGCGACGA CGCCAACCCG GACAAGTTCG TCGGCTCCGC CGAGGACTGG 
GCAACGGCGA CGGCGGTGCT GGAGCAGTGC GCCAGGGACA CCGGGCTCGA CCTGGTGCCG 
GATCCGGGAG GCGCGGCCTT CTACGGTCCG AAGATCTCGG TGCAGGCCAA GGACGCCATC 
GGCCGGACCT GGCAGATGTC GACCATCCAG TATGACTTCA ACCAGCCGGC GGGCTTCGGG 
CTGGAGTACC AGGCCGCCGA TGGCAGCCGT CAGCGGCCGG TCATGATCCA CTGTGCGAAG 
TTCGGCTCGA TCGAGCGGTT CATCGGCGTG CTCACCGAGC ACTACGCCGG GGCGTTCCCG 
GCGTGGCTGG CGCCGGTGCA GGTGGTCGGC ATCCCGATCC GCGAGGACCA CACCGAGTAC 
CTGGACGGGT TCGTCGCCGG GCTGCGCGCT GCGGGGATCC GGGCCCAGGT GGACGCCGGT 
GACGACCGGA TGCAGAAGAA GATCCGCACC GCCCAGCAGC AGAAGATCCC GTTCATGGCG 
ATCGCGGGGG ACGACGACGT GGCGGCGGGC ACCGTGTCGT TCCGCTACCG GGACGGCTCG 
CAACGTAACG GGGTGCCGGT CGCCGAGGCG GTCAGCCACG TCCTCGACGT GGTCAACTCC 
CGCGCCAACC AGGGCCCCTC CGCCGCCCAG GAGTAA 

 

Protein sequence

MSAPRNPVVA DPVVVAAGTT AADAVAAAGL PVAGRAAVVV VRDPQGQLRD LDWTPVEETV 
VEPVGIDTPD GLAVLRHSTA HVLAQAVQDL FPEAKLGIGP PIENGFYYDF AVDRPFQPED 
LTKLEKRMQE IIKSGQRFRR RRFRNLDEAR GELAAEPFKL ELIELKGDGL DSSQVMEVGG 
GELTSYDNLA ADADKVCWSD LCRGPHLPNT RLIGAFKLMR SAAAYWRGSE KNPQLQRVYG 
TAWPTRDELK AYLRLLEEAA RRDHRKLGTD LDLFSFPEEI GSGLPVFHPK GGVLKRTMED 
YVRARHIEEG FDYVGTPHIS KEGLFHTSGH LPYYADGMFP PMHLEGADYY LKAMNCPMHN 
LIYRSRGRSY RELPMRLFEF GSVYRDEKSG VIHGLTRVRG FTQDDSHSYC TKEQAPAEIK 
HLLAFVLGLL QDFGITDFVL ELSTRDDANP DKFVGSAEDW ATATAVLEQC ARDTGLDLVP 
DPGGAAFYGP KISVQAKDAI GRTWQMSTIQ YDFNQPAGFG LEYQAADGSR QRPVMIHCAK 
FGSIERFIGV LTEHYAGAFP AWLAPVQVVG IPIREDHTEY LDGFVAGLRA AGIRAQVDAG 
DDRMQKKIRT AQQQKIPFMA IAGDDDVAAG TVSFRYRDGS QRNGVPVAEA VSHVLDVVNS 
RANQGPSAAQ E