Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1617 |
Symbol | |
ID | 5703398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1848765 |
End bp | 1850282 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641271125 |
Product | polymorphic membrane protein |
Protein accession | YP_001536500 |
Protein GI | 159037247 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.926452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.174352 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTATC AGGATCACAA CCGCGGACAC GAGTGGGATC GTTGTGGTGG TGGCCTTTCG CGGCCACGGT GGCGGTGGTG GGTCGTCGGG TTGGCGGGGA TGACCGGCCT GGCGCTGACT GTCGTTGGTG GTGTGGCGAC GCCGGCCGTC AATGCGGGCG GACGTGTCCT CACCAGCGTC GAGGAGCAGC CTGGGGAGTC CGCCGGGGAT CGGCCCGGGG GTGGGCACCG CGACGACGGC GAGTCCACCC GGGGAAAGGC CACACGTGAG CAGTCCCCGC GTGAGGACAA GGGTCAGGGT AACGCGGCTG AGGGCAGAAG CAGCGGCGGC GACGAGGGCA AGGGCGTTCA GGGCAAGGGC AAGGGTGTTG TCGAGGGCAT GGGTGAGGCC AGGGGGAGGA AGGGGGGTAA GCGGCAGGGT ACGCCGGTCG CGTGCGACGT GGACAGGTTG ATCGCTGCGA TCAGTGCGGG TAATGCTCGT GGTGGTGCCG TGCTCGACCT GGCCAAGGGT TGTACCTATC TGCTGACTGC TGATCTCGGG GGTGCTGGTC TGCCCGTGAT CACCGCCCCG ATCACGCTCA ATGGTGGTAA GCACACGACT CTCAAGCGTG CCGCTGGGGT TGACCAGTTC CGGATCCTCA CCGTCGACAC CGGCGGTGAG CTCACCCTCA ACCACTTGAC TGTCACCGGC GGGCAGACCA TCGAGAACGG CGGGGCGATC TTTGTCAACG CCGGTGGTGC TCTCACCCTC GATCACACCA AGATCGTGCG CAACATCAGC GCACAGGGAG GCGGCGGCAT CCGGAACGCG GGAACCGTCA CCATCAAACA CTCCCGCATC GAACGGAACA TCGCCAATGA GAACGGGGGT GGGATCCTCA GCACGGGCGT GCTCCGGATG CACTCCTCCG CTGTGGACGG CAACGTCGCC ACCAACGGTG GTGGCATCTC CAGCACCGGC ACCGTTACTG CTGCCCGCAG TGAAATCACC GGAAATCGAG CAACATCCGT GGTCGGCGGC GGGTTGCTCG TCACCGGAGG AACCGCATCG GTCACCGATT CTCGGGTGGT CCGCAATTCC TCCAACACTG AGGGCGGCGG GGTTGTGGCC ATTACCTCGC AGATCACCCT GCACCGTGTC GTCATCGCCG ACAACGCCGC CCGCAGTGGC GGTGGTGGGT TGATTGTCGG TGCCTCCTCA GCCGTCGTCC GGAAGGGTGT TATCAAGGGC AACACCGCCA ACACCGATGG CGGAGGTGTA TTCAACGCTG GTGAGTTGTC ACTGTTCGAC ACCCACGTCC ACAGCAACCG TGCCGGTCGT GGAGCGGGCA TCTACAATAA CGCACTCGGT GCCCTCATCC TGTACGACAG CACGATTAAG AAGAATATCG CTGTCGCCGA GGGTGGTGGG ATCTTCAACG AGGCGGCTGG AACGGTCGAT CTGAACACAG CTACTGGCAC AATTGTCATC AAGAACCGGC CCGACAACTG CGTCAACGTT GCCGGCTGCC CGGGCTGA
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Protein sequence | MSYQDHNRGH EWDRCGGGLS RPRWRWWVVG LAGMTGLALT VVGGVATPAV NAGGRVLTSV EEQPGESAGD RPGGGHRDDG ESTRGKATRE QSPREDKGQG NAAEGRSSGG DEGKGVQGKG KGVVEGMGEA RGRKGGKRQG TPVACDVDRL IAAISAGNAR GGAVLDLAKG CTYLLTADLG GAGLPVITAP ITLNGGKHTT LKRAAGVDQF RILTVDTGGE LTLNHLTVTG GQTIENGGAI FVNAGGALTL DHTKIVRNIS AQGGGGIRNA GTVTIKHSRI ERNIANENGG GILSTGVLRM HSSAVDGNVA TNGGGISSTG TVTAARSEIT GNRATSVVGG GLLVTGGTAS VTDSRVVRNS SNTEGGGVVA ITSQITLHRV VIADNAARSG GGGLIVGASS AVVRKGVIKG NTANTDGGGV FNAGELSLFD THVHSNRAGR GAGIYNNALG ALILYDSTIK KNIAVAEGGG IFNEAAGTVD LNTATGTIVI KNRPDNCVNV AGCPG
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