| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1603 |
|---|
| Symbol | |
|---|
| ID | 5703458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 1832296 |
|---|
| End bp | 1833033 |
|---|
| Gene Length | 738 bp |
|---|
| Protein Length | 245 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641271112 |
|---|
| Product | two component LuxR family transcriptional regulator |
|---|
| Protein accession | YP_001536487 |
|---|
| Protein GI | 159037234 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0252513 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCAGCC TGACCAATCC GCCCGGCGGG TCGGGCCCCG CGGGGCTGAA CGGCCCGCCG
GCGGGTGGTG GAGCGCCGGC CGGTCCGGTT CGGGTGTTGA TCGTCGACGA CGATCCGCTG
GTGCGGGCCG CACTGTCGAT GATCATCGGC GGTGCGCCGG ACCTCGTGGT GGTGGGGGAG
GCCACCGACG GCACCGAGGT GCCCGCTGCC GTGGCCGCGT GCGCTCCGGA CGTCGTTCTG
ATGGACATCC GCATGCCGCG GCTCGACGGG CTGGCTGCCA CCGAGGAGCT GCGGTCCGCG
CCCAACCCGC CCGAAGTGCT GGTGTTGACC ACGTTCGATG CCGACGAACA GGTGCTGCGG
GCGCTGCGGG CTGGGGCGGG CGGCTTCCTG CTCAAGGACA CCGCACCGGC CGAGATCGTG
CATGCCGTCC GCCGGGTGGC AGCGGGTGAG ACCATGCTCT CCCCGACGGT CACCCGCCAA
CTGGTCGCGC ACGTCACCGG GGCCGTCGGC GTCGACCCGC GCCGCCAGCG GGCACGGCGG
CAACTCGCCA CGTTGAGCGA GCGGGAGCGG GAGGTCGCGA TCGCGCTCGG CCAGGGCCGC
AGCAACGCCG AGATCGCGGG GGAGCTGTTC ATGAGTGTGG CGACGGTCAA GGCGTACGTG
TCGCGGCTGT TGGTGAAGCT GGACCTCAAC AACCGGGTCC AGGTGGCGCT CCTGGTCCAC
GACGCCGGTC TGGTCTGA
|
|---|
| Protein sequence | MASLTNPPGG SGPAGLNGPP AGGGAPAGPV RVLIVDDDPL VRAALSMIIG GAPDLVVVGE
ATDGTEVPAA VAACAPDVVL MDIRMPRLDG LAATEELRSA PNPPEVLVLT TFDADEQVLR
ALRAGAGGFL LKDTAPAEIV HAVRRVAAGE TMLSPTVTRQ LVAHVTGAVG VDPRRQRARR
QLATLSERER EVAIALGQGR SNAEIAGELF MSVATVKAYV SRLLVKLDLN NRVQVALLVH
DAGLV
|
|---|
| |