Gene Sare_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1602 
Symbol 
ID5703457 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1831031 
End bp1832308 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content73% 
IMG OID641271111 
Producthistidine kinase 
Protein accessionYP_001536486 
Protein GI159037233 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0369038 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAGCG CCGCTGTACC CGAACACCCC TGGCTCCTTC CGGGCGCCCT GACGGCCCCC 
ACGGCCCGGG TCCGGCGGAC ACCGCGGGAC TGGTTCGTCG ACAGCCTCTG CTTCCTGGCC
GCCGTCGGCT GGGCGGTGGT GGCGTGGGGC GATTCGCTGT CGGCCGAGCC GGCGTTGGCG
CTGAACGTCG GCCCGAGCTG GCTCAACGAG GTCGATCTTT TGGCCAGCCT GGTGCTCTGC
GGTGCTCTCT GGGTCCGTCG GCGCTGGCCG GTGGGGTTGG CGTTGGCCAG CCTGCCGCTG
GCGCTGTTCT CGGTCGGCTC CGGTGTGGCG CTGCTGATCG TCCTGTTCAC GGTGACCCTG
CACCGGCCGT TCCCGGTCGC CGCCGGCATG TTCGGTGCAC ACCTGCTTGC CACGCCGATC
CATCTGCGGC TGCGCCCCGA ACCGGCGATG TCGCTGTGGT TGATCGTGGG GTGGACCCTG
TTGTTCCTCG GGGCCGTGCT GGCTTGGGGG ATGTTCGTCC GGGCGCGCCG GCAACTGGTG
GTGTCGTTGC GGGAGCGGGC ACACCGGGCC GAGGCTGAGC AGCAGCTGCG GGTGACGCAG
GCCCGGCAGT TGGAACGTAC CCGCATCGCC CGGGAGATGC ATGACGTGTT GGCTCACCGC
ATCTCGTTGC TCAGTCTGCA CGCCGGAGCA CTGGAGTTCC GCCCGGATGC CTCGCCTCAA
GAGGTGGCCA GGGCGTCCGG GGTGATCCGG GACAGCGCAC ACGCCGCCCT GCGGGACCTG
CGGGAGGTGA TCGGGGTGCT CCGGGCGGAG ACCGGAGTGG CGGAGGGTGC CGAACCGGAG
CGGCCTCAGC CCACCCTCGT CGACGTGCCG ACGCTGATTC GCGAGTCCCG AGCCGCCGGT
GTTCGGGTGA GTGTCATCGA GGAGGTCGCC GACCGGGCGG AGGTGCCGCC CGTGGTGGGG
CGCAGCGCGT ACCGGATCGT GCAGGAGGGG CTGACCAACG CCCGCAAGCA CGCCCCGGGC
GCGGTGGTCG ACGTGCGGCT CGCCGGGGGC CGGGGCGCCG GGCTCACGGT CGAGATCCGC
AATCCCTGGC CGGTCGGGAC GGCAGGGCAG GGCGCGGCAG GGCAGGGCGC GGCCGGCTCC
GGTGCCGGCA TCCCCGGCGC CGGGACCGGG CTCGTCGGCG TAGCCGAGCG GGTCGGCCTG
GCCGGCGGGC GGCTGGAGCA CGGACGGGAC GCAGCCGGGC ACTTTCGGCT TGCCGCGTGG
CTGCCGTGGC CAGCCTGA
 
Protein sequence
MTSAAVPEHP WLLPGALTAP TARVRRTPRD WFVDSLCFLA AVGWAVVAWG DSLSAEPALA 
LNVGPSWLNE VDLLASLVLC GALWVRRRWP VGLALASLPL ALFSVGSGVA LLIVLFTVTL
HRPFPVAAGM FGAHLLATPI HLRLRPEPAM SLWLIVGWTL LFLGAVLAWG MFVRARRQLV
VSLRERAHRA EAEQQLRVTQ ARQLERTRIA REMHDVLAHR ISLLSLHAGA LEFRPDASPQ
EVARASGVIR DSAHAALRDL REVIGVLRAE TGVAEGAEPE RPQPTLVDVP TLIRESRAAG
VRVSVIEEVA DRAEVPPVVG RSAYRIVQEG LTNARKHAPG AVVDVRLAGG RGAGLTVEIR
NPWPVGTAGQ GAAGQGAAGS GAGIPGAGTG LVGVAERVGL AGGRLEHGRD AAGHFRLAAW
LPWPA