Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1593 |
Symbol | |
ID | 5705997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1824397 |
End bp | 1826073 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641271102 |
Product | regulator of chromosome condensation RCC1 |
Protein accession | YP_001536477 |
Protein GI | 159037224 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning [Z] Cytoskeleton |
COG ID | [COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins |
TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0107683 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00113997 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGAGAGAC TCTGCCAGCG GCCAGGCCGT AGCGCCGGCG TGGGCCGGGT CGGCCGAGCG ATCTCCGGCT GGTGCTTTCT GGTGTTGGCG GTGACCGTCA TGCAGGGGGC CACCGTCTGG CCTGCGGTCG CGCAACCCGG CTCAGCCACA CCGTCCGGTG TCGCCTCGGA CACCATTCTG GCCTGGGGGG CAAACAACGT CGGCCAACTC GGCGATGGAA GCACCATCGC CCGCAACGCA CCCGTGGCCG TGAGCCTACC CCCGGACACC ACGGTCACCG CCGTCGCCGG CGGCGACAGC CACAGCTTGG CGTTGACCTC CGCCGGCGCG GTCCTCGCCT GGGGGGAAAA CAACTTCGGC CAACTGGGCA CCGGAAACAA CCTCAACAGC TCCGTCCCCA TCACCGTGGC GCTCCCCCCG GACACCACGG TTGTCGCCAT CGCCGCTAGC CACGGGCACA GCCTGGCGTT GACCTCCGCC GGCGCCGTCC TCGCCTGGGG GGCAAACAAC GTCGGCCAAC TGGGCAACGG AAACACCTTC AACAGCAACA CACCTGTGAC CGTGAACCTG CCCCCAGGCA CCACAGTCGC CACCATCGCC GCCGGCACCA ACCACAGTCT GGCGATCACC TCCACCGGCG CTGCCCTCGC CTGGGGCGGC AACGGCAACG GCCAGTTGGG CAACAATTCG ACGGCCACCA GCCTCGAACC CATCGCCGTG ACGCTACCCC CGAGCACCAC AATCACTGCC ATCGCCGCCG GCAGCTCCTA CAGTCTGGCG ATCACCTCCA CCGGCACCGC CCTCGCCTGG GGCGGCAACA GCAACGGCCA GTTGGGCACC GGAAACAACG CCGACAGCCT CATACCCATC GCCGTGGCGC TCCCCCCGGG CACCACGATC ACCTCCATCG CCGCCGGCTT CACCCACAGC CTGGCGGTCA CCTCCACCGG CACCGCCCTC GCCTGGGGCG GCAACAGTAG GGGCCAATTG GGCATTGGAA CCACCACCAA CAGCGACACA CCCGTGATCG TGAACCTGCC CCCGGACACC ACAATCACCA CCAACGACGG CGGCTTCTTC CATAGCCTGG GATCGATGTC TACCGGCGCT GCTCTCGCCT GGGGCAACAA TTTTTCCGGT CAGTTGGGCA CCGGAAACAA CACCAACAGT CTCGACCCCA TCGCCGTGGC CCTACCCTCG GGCACCAAAA TCACCACCAT CGCCGCCGGC GGCGGGCACA GTCTGGCCCT GGTCGCACCA CCAACATCCA CCACCCTGCA GGTCACCCCA CCAAACCCGA CCGTGGGTCA GGACGTCACT CTCACCGCCG CCGTTACCTG CAACGTCGAC ACGCCCACCG GAACAATCAC CTTCCGCAGC AACAGCACCG CCCTCGCCAC CGTTCCCCTG ACCGCCAGCA GCACCGCCAC CCACGTCACG ACACTGCCCG GCGGCACCCA CACCCTGACC GCCGACTACA TCAGCACCAA CACCTGCCCC AACAGCCAGT CCACACCCGT CAGCGTCACC ATCAACCCAC CGCCCGACGA GCCCGACCTA CCCATCACCG GCCCCAACAT GACCGCCGGC ATCGGCGCTG CCGCCCTGTC CATCCTGGCC GGCGTCATCC TCATCTACGC CGCACGTCGA CACCAACCAC CACACCAGCC CGAATAG
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Protein sequence | MERLCQRPGR SAGVGRVGRA ISGWCFLVLA VTVMQGATVW PAVAQPGSAT PSGVASDTIL AWGANNVGQL GDGSTIARNA PVAVSLPPDT TVTAVAGGDS HSLALTSAGA VLAWGENNFG QLGTGNNLNS SVPITVALPP DTTVVAIAAS HGHSLALTSA GAVLAWGANN VGQLGNGNTF NSNTPVTVNL PPGTTVATIA AGTNHSLAIT STGAALAWGG NGNGQLGNNS TATSLEPIAV TLPPSTTITA IAAGSSYSLA ITSTGTALAW GGNSNGQLGT GNNADSLIPI AVALPPGTTI TSIAAGFTHS LAVTSTGTAL AWGGNSRGQL GIGTTTNSDT PVIVNLPPDT TITTNDGGFF HSLGSMSTGA ALAWGNNFSG QLGTGNNTNS LDPIAVALPS GTKITTIAAG GGHSLALVAP PTSTTLQVTP PNPTVGQDVT LTAAVTCNVD TPTGTITFRS NSTALATVPL TASSTATHVT TLPGGTHTLT ADYISTNTCP NSQSTPVSVT INPPPDEPDL PITGPNMTAG IGAAALSILA GVILIYAARR HQPPHQPE
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