Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1539 |
Symbol | |
ID | 5703520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1775024 |
End bp | 1776733 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641271050 |
Product | regulator of chromosome condensation RCC1 |
Protein accession | YP_001536426 |
Protein GI | 159037173 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning [Z] Cytoskeleton |
COG ID | [COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins |
TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.781451 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00406058 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGGGGAG TCGGTCAGCG GCCGGGCCGT GGTGTCGGAG CGCGCCGGGC GGCGAGGGTC ATCGCCGGGT GGTTCTGCCT CGCAGTGGTG GTGACGGCCG TCCAGGCGGG CGGCGTGTCG TCCGCGATCG CGCAGCACAC GTCGGTAGCG CAGCACAGGC CATCACCGAC CACTGTCGCG TCGGATGCCG TCCTCGCGTG GGGCGACAAT TACTACGGCC AGTTGGGGGA TGGAACCACC AACAACTACC GCACCGTACC CATCCCCGTG GGTCTGCCCA AGGGTACTGA GGTGACCGCT GCCGCGGGCG GCGATGCGCA CAGTTTGGCG GTGACGTCGG CCGGCACCGT TCTCGCCTGG GGCAGAAACG CCGTTGGCCA GTTGGGCGAC GGGACCACCA TCAATCGCAG CACTCCCGTC GACGTCCGCC TGCCGCCGGG CACCACGGTC ACCGCCGTCG CCGCCGGCTT CAACCACAGT CTGGCGTTGA CCTCGGCCGG CACCGTCTTC GCTTGGGGTG ACAATTCGAC CGGTCAGTTG GGTGACGGGA CCAGGACGAA CCGCAGTACG CCGGTGGCGG TGAGTTTCCC GTCCGGCACG GTGATTACCG CGGTCGCCGC CGGTGGCATG CACAGTCTGG CGTTGACCTC GGCCGGCACC GTCTTCGCTT GGGGTGACAA TTCGACCGGT CAGTTGGGTG ACGGGACCAG GACGAACCGC AGTACGCCGG TGGTGGTGGG GTTGCCGGTG GGCACGATTG TTACCGCCAT CGCCGGTGGA GGCTCGCATA GTCTGGCGGT GACCTCGGCG GGCAACGCCC GTGCCTGGGG CAACAATTTC GTTGGCCAGT TGGGCGACGG GAGCAATATC AACCGCGACG CTTCCGTTCA CGTCCGCCTG CCCCCGGGCA CCACGGTCAC CGCCGTCGCC GGCGGCCTCA CCCACAGTCT GGCGTTGACC TCGGTCGGCA CTGTTCTCTC CTGGGGCAGC AACAACTGGG GTCAGTTGGG TGATGGGACC GCCAGGGACC GGAACACGCC CGGCTCGGTG AGCCTGCCCC CCGGCGTCAC GATCACCGCG GTCGCCGCCG GTGATCTCTT CGGCCTGGCG CTCACCTCCG CCGGCACCGT CCTCGCCTGG GGCGGCAATA TCGTCGGGCA GCTGGGTGAC GGGACCACCA CCGTTCGCCG GACGCCCGTC GCGGCCAGCC TGCCCACGGC AACCACGATC ACCGCCATCG CCACCGGCAG CGGCCACAGC CTGGCCTTGG TCGCACCGCG ACCAGCGTCC ACCACAACCC TGCGAGTCTC GCCCCGAAAC CCGACGGCCG ACCAGGACGT CACCCTCACC GCCACCATCA CCTGCACCAC CGACACCCCC ACCGGCAGCG TCACCTTCCG CAGTAACACC ACCGACCTCG CCACCGTGCC GCTGGGCAGC GCCAACACCG CCACCCACAC CACCGGGCTC CCACCCGGCG CCCACACCCT CACCGCCCAC TACGCCAGCA CCAACACCTG CCCCAGCGGC CAATCCGAAT CCACCACCAT CACCATCACC GCACCCGACA ACCCCAACAC ACCCGACGAC CCCGACCTAC CCATCACCGG ACCCAACCTG CCCACCATCC TCGGCACCGC CACCCTGCTC ATCCTCGCCG GCGCCACATT CCTCTACCTC ACCCGTCGCA CCGCACGCCG AGACCCCTGA
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Protein sequence | MRGVGQRPGR GVGARRAARV IAGWFCLAVV VTAVQAGGVS SAIAQHTSVA QHRPSPTTVA SDAVLAWGDN YYGQLGDGTT NNYRTVPIPV GLPKGTEVTA AAGGDAHSLA VTSAGTVLAW GRNAVGQLGD GTTINRSTPV DVRLPPGTTV TAVAAGFNHS LALTSAGTVF AWGDNSTGQL GDGTRTNRST PVAVSFPSGT VITAVAAGGM HSLALTSAGT VFAWGDNSTG QLGDGTRTNR STPVVVGLPV GTIVTAIAGG GSHSLAVTSA GNARAWGNNF VGQLGDGSNI NRDASVHVRL PPGTTVTAVA GGLTHSLALT SVGTVLSWGS NNWGQLGDGT ARDRNTPGSV SLPPGVTITA VAAGDLFGLA LTSAGTVLAW GGNIVGQLGD GTTTVRRTPV AASLPTATTI TAIATGSGHS LALVAPRPAS TTTLRVSPRN PTADQDVTLT ATITCTTDTP TGSVTFRSNT TDLATVPLGS ANTATHTTGL PPGAHTLTAH YASTNTCPSG QSESTTITIT APDNPNTPDD PDLPITGPNL PTILGTATLL ILAGATFLYL TRRTARRDP
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