Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1532 |
Symbol | |
ID | 5708323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1766301 |
End bp | 1767170 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641271043 |
Product | UspA domain-containing protein |
Protein accession | YP_001536419 |
Protein GI | 159037166 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000990893 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACGGCA CCGGAGTCCT GGTCGGCTAC GACGGCTCAC CCGACGCCGA ACGGGCCCGG GACTGGGCGC TGGACGAGGC CGCGCGGAGC GGGCAGCCGG TGCACCTCGC GTACGTCTTC GAATGGCTCA CCATGGCCGG GTGGACCGGT CCCGGTGGGG GGCCCAGCAT CTGGCCGGAC GACTCGGCCC GACGGCAGGC GGCGGAACTG GTCCGGCAGG CGGCCCAGGA GGCGACAGGC CCGGACCTCG CCGTCACGGG TGAGTTGTAC GAAGGGCCTC CCGCCCCGGT GCTCCAGGAG CTGTCGGCGC GTGCCAGCCT GCTGGTGCTC GGTACGCGCG GGCTCGGCGG CTTCGCCGGT CTGCTGGTCG GCTCGACCGC GGCGTCGGTG GCCGCGCACG CCCACTGCCC GGTGGTGGTG GTCCGGGGCG ACGCCGACCG TCGAACGCGG GCCGGACACG TCGCGGTCGG CGTGGACGGT TCGCAGTCGT CGCTGCTCGC CCTGGGCTTC GCTGTCGAGC AGGCCGCCGC CCGCCGGGTA CCACTGCACG TGCTGCGCGG ATGGCGTCCA CCGCCGGGTC AGCGCCCGCC GTCTGGCCCG GACTCCCGGG AGGTGACCCG GGCTGACCGC GCCGAGCTGG ACGAGTCGCT GTCCCAGTGG CGGCAGGCGT TCCCGGACGT CACCATCTCG GTGGAGGTGG CCGAGGGTAA CCCGGCCGAG CTGCTCGTGT CGGCGAGCCG TAACGCGCAG CTGGTCGTGG TCGGCACCCG GGGCCGAGGC GGCCTGGCGG GGATGCTGCT CGGTTCGGTC AGTCAGCAAC TCCTGCACCA CGCGCACTGT CCGGTCGCCG TGGTGCGCGA ACGCCGCTGA
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Protein sequence | MNGTGVLVGY DGSPDAERAR DWALDEAARS GQPVHLAYVF EWLTMAGWTG PGGGPSIWPD DSARRQAAEL VRQAAQEATG PDLAVTGELY EGPPAPVLQE LSARASLLVL GTRGLGGFAG LLVGSTAASV AAHAHCPVVV VRGDADRRTR AGHVAVGVDG SQSSLLALGF AVEQAAARRV PLHVLRGWRP PPGQRPPSGP DSREVTRADR AELDESLSQW RQAFPDVTIS VEVAEGNPAE LLVSASRNAQ LVVVGTRGRG GLAGMLLGSV SQQLLHHAHC PVAVVRERR
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