| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1454 |
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| Symbol | |
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| ID | 5704165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1679471 |
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| End bp | 1681453 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641270963 |
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| Product | 1-deoxy-D-xylulose-5-phosphate synthase |
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| Protein accession | YP_001536344 |
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| Protein GI | 159037091 |
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| COG category | [H] Coenzyme transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG1154] Deoxyxylulose-5-phosphate synthase |
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| TIGRFAM ID | [TIGR00204] 1-deoxy-D-xylulose-5-phosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0111876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTTG AACCGGACAC GGCAAACCAC CCGGGGCTGC TGGCCGCCGT ACGCGGCCCG
CAGGACGTCA AGCGGATGTC CACCGAGCAG TTGGGCATCC TCGCCGCCGA GATCCGTGAC
TTCCTGGTCG CCAAGGTCTC CCGCACCGGC GGGCACATCG GCCCCAACCT GGGCGTGGTG
GAGCTGACCC TCGCGCTGCA CCGGGTCTTC GACTCCCCGC GGGACCGGCT CCTGTTCGAC
ACCGGCCACC AGGCCTACGT ACACAAGATC CTCACCGGCC GGCAGGACGG CTTCGACCGG
CTGCGCCAGC GTGACGGGCT CTCCGGCTAC CCGAGCCAGG CCGAGAGCGA GCATGACCTG
ATCGAGAACT CGCACGCCTC CACCGCCCTG TCCTACGCCG ACGGGCTGGC CAAGGCGTAC
GCGCTGCGGG GTGAGTCCCG GGCGGTGGCG GCCGTGGTCG GCGACGGCGC GCTGACCGGC
GGTATGTGCT GGGAGGCGTT GAACAACATT GCGACCGCCG GCAACCCACT GGTGATCGTG
GTCAACGACA ACGGCCGGTC CTACTCGCCG ACCATCGGTG GGCTCGCCGA CCACCTGTCG
ACGCTGCGCC TGAATCCCAG CTACGAGCGG GTGCTGGACA CGGTCCGCGA GGCGCTCGGC
TCGACCCCGC TGGTCGGCCG GCCGATGTAC GAGGTGCTGC ACGCGGTCAA GCGGGGCATC
AAGGACGCGG TCGCGCCGCA GGCGATGTTC GAGGACCTCG GCATCAAGTA CGTCGGCCCG
GTCGACGGGC ACGACATCGT GGCGGTCGAG GGGGCCCTGC GCGCGGCGAA GAACTTCGGC
GGCCCCGTGA TCGTGCACGC GGTCACCCGC AAGGGCTACG GGTACCGCCC GGCCGAGGAG
GACGAGGCCG ACTGCCTGCA CGGCCCGGGC GCGTTCAACG TCGAGACCGG CCAACTGGTC
GCCGCGCCGA CGGTGAAGTG GACCCACGTC TTCGCCGACG AGTTGGTGGC GATCGCCGAC
GAGCGACCGG ATGTGGTGGG GATCACCGCC GCGATGGCCG AGCCGACCGG CATCGCCAAG
CTCGCCCGCA AGTATCCGGA GCGCACCTAC GACGTGGGTA TCGCCGAGCA GCACGCCGCC
ACCTCGGCGG CCGGCTTGGC GCTGGGCGGT CTGCACCCGG TGGTCGCGGT CTACGCGACC
TTCCTGAACC GGGCGTTCGA CCAGGTCCTG CTGGACGTGG CGATGCACAA GCTGCCGGTG
ACCTTCGTGC TCGACCGGGC CGGGATCACC GGCCCGGACG GGCCCAGCCA CTACGGCATG
TGGGACATGT CCGTCTTCGG GGTGGTGCCG GGCCTGCGGA TCGCCGCGCC CCGCGACGCC
GCCACCCTCC GCGAGGAACT GCGCGAGGCA GTCGCCGTCA ACGACGGGCC GACCATCGTC
CGGTTCCCGA CCGGCGCCGT CGCCGCCGAC CTGCCGGCGC TGCGCCGGGT CGGGCCGGTC
GACGTGCTCG CCGAGTCGGC CCGCACCGAC GTGCTGCTGG TCGCGGTCGG CTCCTTCGCC
GGCCTGGGTG TGCAGGTCGC CGGCCGGGTC GCCGAGCAGG GCTACGGTGT CACCGTCGTG
GACCCGCGCT GGGTCCGGCC GGCCCCGGCC GAACTGGTGG AACTGGCCGC CGGGCACCGG
CTCGTGGTCA CCGTGGAGGA CGGCGTCCGG GTTGGTGGGG TCGGCGACGC GCTCGCCCAG
GCGATGCGGG ACGCCGACGT CGAGGTGCCG GTGAAGGACC TCGGAGTGCC GGCCGACTGG
CACCCGCACG GCACCCGGGC GCAGATCCTC GCCGACCTCG GTCTGACCGC CCAGGACGTG
GCCCGCGACG TCACCGGCTG GATCTCCCGC CTCGACGTCG ACGCCGCCGA CACCGAGGAC
GCGCTCGCGT CCGAGCCGGT GGGGTCGGTC GTCACCCCGC GGGAGGCTCC CGCTCCGAAG
TGA
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| Protein sequence | MSVEPDTANH PGLLAAVRGP QDVKRMSTEQ LGILAAEIRD FLVAKVSRTG GHIGPNLGVV
ELTLALHRVF DSPRDRLLFD TGHQAYVHKI LTGRQDGFDR LRQRDGLSGY PSQAESEHDL
IENSHASTAL SYADGLAKAY ALRGESRAVA AVVGDGALTG GMCWEALNNI ATAGNPLVIV
VNDNGRSYSP TIGGLADHLS TLRLNPSYER VLDTVREALG STPLVGRPMY EVLHAVKRGI
KDAVAPQAMF EDLGIKYVGP VDGHDIVAVE GALRAAKNFG GPVIVHAVTR KGYGYRPAEE
DEADCLHGPG AFNVETGQLV AAPTVKWTHV FADELVAIAD ERPDVVGITA AMAEPTGIAK
LARKYPERTY DVGIAEQHAA TSAAGLALGG LHPVVAVYAT FLNRAFDQVL LDVAMHKLPV
TFVLDRAGIT GPDGPSHYGM WDMSVFGVVP GLRIAAPRDA ATLREELREA VAVNDGPTIV
RFPTGAVAAD LPALRRVGPV DVLAESARTD VLLVAVGSFA GLGVQVAGRV AEQGYGVTVV
DPRWVRPAPA ELVELAAGHR LVVTVEDGVR VGGVGDALAQ AMRDADVEVP VKDLGVPADW
HPHGTRAQIL ADLGLTAQDV ARDVTGWISR LDVDAADTED ALASEPVGSV VTPREAPAPK
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