Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1400 |
Symbol | |
ID | 5704086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1616772 |
End bp | 1618280 |
Gene Length | 1509 bp |
Protein Length | 502 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641270910 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_001536291 |
Protein GI | 159037038 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00158929 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGTCATGA CTACCGCAGC GGCGAGCAGC CCACGCACCT ACCAGGTGCG CACGTACGGC TGCCAGATGA ACGTACACGA CTCCGAGCGC ATCGCCGGCC TCCTCGAGCA GGCCGGCTAC CTGCGGGCCG GGGACGCCGA CGACGTCCCC GACGTGGTCG TCTTCAACAC CTGCGCCGTG CGGGAGAACG CCGACAACCG GCTCTATGGC AACCTCGGCC AGCTGCGTCC CAGCAAGGAC CGGCACCCGG GGATGCAGAT CGCGGTGGGT GGCTGCCTGG CCCAGAAGGA CCGCAGCGAG ATCGTCCGTC GGGCGCCCTG GGTCGACGTG GTCTTCGGCA CGCACAACAT CGGGTCGCTG CCGGTGCTGC TGGAACGGGC CCGGCACAAC GCCGCCGCCG AGGTGGAGAT CCTGGAGTCC CTCGACGTCT TCCCGAGCAC CCTGCCCACC CGCCGCGAAT CGACGTACGC CGGTTGGGTG TCGATCTCGG TCGGCTGCAA CAACACCTGC ACGTTCTGCA TCGTGCCCGC GCTACGCGGC AAGGAGCGGG ACCGCCGCCC CGGCGACGTC CTCTCCGAGG TACGCGCCCT GGTCGACGAG GGCGTGCTGG AGGTGACCCT GCTCGGACAG AACGTCAACT CCTACGGCAT CGAGTTCGGC GACCGGTACG CGTTCGGCAA GCTGCTGCGG GCCTGCGGCG ACATCGACGG CCTGGAACGG GTGCGCTTCA CCAGCCCACA CCCGAAGGAC TTCACCGACG ACGTGATCGC CGCCATGGCC GAGACACCGA ACGTCTGCCA CTCGCTGCAC ATGCCGTTGC AGTCCGGCTC CGACGACGTG CTGCGGGCCA TGCGCCGCTC GTACCGCTCG GAGCGGTACC TGGGCATCAT CGAAAAGGTG CGGGCGGCGA TGCCGGACGC GGCGATCACC ACCGACATCA TCGTCGGGTT CCCGGGCGAG ACCGAGGCGG ACTTCGAACG CACCCTCGAC GTGGTTCGCT CGGCCCGGTT CTCCTCGGCG TTCACCTTCC AGTACTCCAA ACGCCCCGGC ACGCCCGCCG CGACAATGGC CGATCAGCTT CCGAAGCCGG TGGTGCAGGA GCGCTACGAG CGGCTGGTCG CCTGCGTGGA GGAGATCACC TGGGCGGAGA ACCGGCGCCT GGTGGGGGAG ACCGTCGAGG TGCTGGTGGC CGTCGGTGAG GGGCGCAAGG ACGAACGCAC CGGTCGGCTG TCCGGGCGGG CACGCGACGG TCGGCTGGTG CACTTCGACG CCGGCAGCCT CGCCGGGCAG ATCCGACCCG GTGACGTCGT GCACACCACC GTCACCTATG CCGCCCCGCA CCACCTCAAC GCCGACGGCG AGCCGCTCGC CCACCGGCGC ACCCCGGCCG GGGACGCGGC CGAGGCGGGG CGTCGACCCC GTACCGCCGG GGTGTCACTC GGGCTGCCCA CGGTCGGTGC CCCACCGTCA CCGGTGCCCC CCGCGGCCTC GTCTGCCTGC GCTTGCTGA
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Protein sequence | MVMTTAAASS PRTYQVRTYG CQMNVHDSER IAGLLEQAGY LRAGDADDVP DVVVFNTCAV RENADNRLYG NLGQLRPSKD RHPGMQIAVG GCLAQKDRSE IVRRAPWVDV VFGTHNIGSL PVLLERARHN AAAEVEILES LDVFPSTLPT RRESTYAGWV SISVGCNNTC TFCIVPALRG KERDRRPGDV LSEVRALVDE GVLEVTLLGQ NVNSYGIEFG DRYAFGKLLR ACGDIDGLER VRFTSPHPKD FTDDVIAAMA ETPNVCHSLH MPLQSGSDDV LRAMRRSYRS ERYLGIIEKV RAAMPDAAIT TDIIVGFPGE TEADFERTLD VVRSARFSSA FTFQYSKRPG TPAATMADQL PKPVVQERYE RLVACVEEIT WAENRRLVGE TVEVLVAVGE GRKDERTGRL SGRARDGRLV HFDAGSLAGQ IRPGDVVHTT VTYAAPHHLN ADGEPLAHRR TPAGDAAEAG RRPRTAGVSL GLPTVGAPPS PVPPAASSAC AC
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