Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1370 |
Symbol | |
ID | 5707289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1585278 |
End bp | 1586195 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641270881 |
Product | SpoOM family protein |
Protein accession | YP_001536262 |
Protein GI | 159037009 |
COG category | [R] General function prediction only |
COG ID | [COG4326] Sporulation control protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.427443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00299545 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGGGCTGT CGCCGGGGTC GAGCCGGACG GGGCTGACCG TCCGGACGGT GTTGGCCAAC CCGAGCACCC GCCCCGGTCT GGGTCTTCCG GGGCGGGTGC TCGTCACCGC TGGCCGGGCT GACGTGCCGG TGCTGCATGT CCGGCTCGGC CTGGTCACGT CGGCCGAGCC GGACGACCCG GAGGCCCCCC GTCAGCTGGT GCAGTTCCAT CAGGCCGAGA TCTCCGGCGG GTTCGTGCTG CGCGCGGGGA GGGTGCGCAG TATCCCGTTC CGGTTTCCGG TGCCCTGGGA GACCCCGGTG ACCGTCGTCG GCGGGATGCC GCTGCTCAGC CTGCGAATGG GTCTGCGTAC CGAGGTGGCG ATCGAGCCCC GGAGCGACCA GGGTGCGATG CTGCCGCTGT TCGTGCACCC GCTGACCACC CAGGCGTATG TTCTCGCCGC CCTGGACGGC CTCGGGTTCA GCCTGCGGCA GGCCGGGTCG GTCGCCGCCC GGTTGCCCGG CGTCGCGCAG ACCCTCTCGC TGCACCAACG GCTGGGCTAC TGGGTCGCAC CGTTGTACGC CGGGCCGATC ACCGAACTGG AGGTGATCTT CATCGCCGAT TCCGCTGGCC TTGAGGTGCT GCTCTGGTGT GACCGGCGGC TGGCGCTGGC GGGGATCACG CACCAGAGCA TCAGCCGGTT CCGGGTCTGG CATGCCGCCG CCGAGCGACA GGACTGGGTG GCGATCGTGG ACGGGTGGCT GCGAATGGCG ATCAATCGGC ACGCGGCGGC GGTGGCGCAC GCCAACTGGT CGGCCCCGAT CAACGAGTCC GTCCACGTGA GCCGGCCCCC GGATGAACCA CTGCGCCCCG GCTACGGGCT GGGCGGTACG GCCGGCGGCG CGGGCGTCGG TGGCGGTGGT GGTGGGGATG GCACGTGA
|
Protein sequence | MGLSPGSSRT GLTVRTVLAN PSTRPGLGLP GRVLVTAGRA DVPVLHVRLG LVTSAEPDDP EAPRQLVQFH QAEISGGFVL RAGRVRSIPF RFPVPWETPV TVVGGMPLLS LRMGLRTEVA IEPRSDQGAM LPLFVHPLTT QAYVLAALDG LGFSLRQAGS VAARLPGVAQ TLSLHQRLGY WVAPLYAGPI TELEVIFIAD SAGLEVLLWC DRRLALAGIT HQSISRFRVW HAAAERQDWV AIVDGWLRMA INRHAAAVAH ANWSAPINES VHVSRPPDEP LRPGYGLGGT AGGAGVGGGG GGDGT
|
| |