Gene Sare_1225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1225 
Symbol 
ID5706392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1373653 
End bp1374561 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content52% 
IMG OID641270742 
Productaminoglycoside phosphotransferase 
Protein accessionYP_001536123 
Protein GI159036870 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0510] Predicted choline kinase involved in LPS biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.84764 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACGA AGGGAACCTC GCAAACATTC GACTCGTTGA TGGCAGCATC GATCCTTGAA 
GAAGCCTGCT CTATTATCGG TGTTTCACCA GTCAATGTAA AGCTTATGCG GCTTGGAGAA
AATGCGATCT TCTCAGTGGA GAATAGCAGT CTCGTTGTTC GCATTGCTCG CAGCAATGCC
TACTGGAAGG ACTCGGAGAA GGAAGTTCGG GTTGCTCAAT GGCTAGAACG GTGTAAGGTG
CCCGCCGTGC GCCTCTATCC AGTGGTGGAG CAGCCAATCT CAGTAGGTGG CCATCCTGTA
ACCTTTTGGA ATAGAGTCGC CGACACCGGC GAAAAGGCGC TAGCTAGCGC TTTGGGTGCG
GTGCTTCGCC GCGTTCATGA TTGCAAGATC GATGAATACG TTAGGCTCCC AAGTCTCGAC
ATATTTGGTC GCATTAGCGC CCGGCTAGAT AATGCGACAA GCATTTCGAC GGAGGTTGTC
GACTTTTTCC GCTTTCGTTT GAAAGACCTA CAAAACGCGT ATGCCGCACT TTCATTTCCA
AGCCTTCCCG TCGCACTTCA CGGCGACGCC CATGTGAAAA ATCTTATCTG CACTCCCAAT
AACGAGGTTA TACTGATTGA TTTCGAGGGT TTCTGCATTG GACCACCCGA GGTGGACCTG
GCAAGGACAG CTACCGAGTA CGAGTTGGGA TGGCACAGTT CCGCCGAATA TCATGCGTTT
TGTGAGGCAT ACGGCGCGGA CGTAAGGGAT TGGGAAGGTT TCGAGGTCCT TCGTGATATT
GACCTGTTCA AAATGACAAC CTGGCTAATG CAAAATGTGG GTGAAAGCGA CCGGCACGCC
GAGGAGTTCG AGAGGCGGCT AGCTACCCTC CGATGTTCGG AAATGGCGTT GGGATGGCGG
CCGTTCTAG
 
Protein sequence
MSTKGTSQTF DSLMAASILE EACSIIGVSP VNVKLMRLGE NAIFSVENSS LVVRIARSNA 
YWKDSEKEVR VAQWLERCKV PAVRLYPVVE QPISVGGHPV TFWNRVADTG EKALASALGA
VLRRVHDCKI DEYVRLPSLD IFGRISARLD NATSISTEVV DFFRFRLKDL QNAYAALSFP
SLPVALHGDA HVKNLICTPN NEVILIDFEG FCIGPPEVDL ARTATEYELG WHSSAEYHAF
CEAYGADVRD WEGFEVLRDI DLFKMTTWLM QNVGESDRHA EEFERRLATL RCSEMALGWR
PF