| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1197 |
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| Symbol | trmD |
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| ID | 5704103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1349008 |
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| End bp | 1349781 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641270715 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001536096 |
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| Protein GI | 159036843 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACGTCG ACGTCGTGTC GATCTTCCCG GAGTACTTCG CCCCACTGGA CCTGTCACTC
ATCGGCAGGG CCCGCGCCAG CGGCACCCTC CGACTGGCCG TACACGACCT ACGTGCCTGG
ACCCACGACG TGCACCGTAC GGTCGACGAC ACGCCGTACG GCGGGGGACC GGGCATGGTG
ATGCGGCCGG AGCCGTGGGG GGAGGCGTTG GACGCGCTCG CCCCGCCGGG AGGCACCCCA
CCTCGGCTGC TGGTGCCCAC GCCGGCCGGT GTCCCGTTCA GCCAGGCGCT GGCCCACGAA
CTGGCCTCCG AGTCACACTT GCTCTTCGCC TGTGGCCGGT ACGAGGGGAT CGACCAACGA
GTACTCGATC ACGCGGCAAG CCGGATGCCG GTCACCGAGG TGTCCCTCGG TGACTATGTG
CTCTTCGGTG GCGAGGTCGC GGTGTTGGTG ATCCTGGAGG CGGTGACTCG GCTGCTGCCC
GGGGTCCTTG GCAATGTCGG ATCGCTGGAC GACGAGTCGC ATGCCCATGG GTTGCTGGAG
GCCCCGATGT ACACCAAGCC GGCTGCCTGG CGGGACCGGG AGGTGCCGGC GGTACTTCGT
TCCGGGGACC ATGGAAAGAT CGCCCGCTGG CGCCGGAACG AGGCCTTGGT ACGGACGGTT
GCCCGACGTC CTGACATGAT CGCCGCGTTG GCTCCGGAGA GCCTGGACCC GCGGGACCGA
GCAGTGTTGG AAGGGGCCGG ATTTTCGGCT CCGCCCGGGG ATGTGGCAGA GTAG
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| Protein sequence | MHVDVVSIFP EYFAPLDLSL IGRARASGTL RLAVHDLRAW THDVHRTVDD TPYGGGPGMV
MRPEPWGEAL DALAPPGGTP PRLLVPTPAG VPFSQALAHE LASESHLLFA CGRYEGIDQR
VLDHAASRMP VTEVSLGDYV LFGGEVAVLV ILEAVTRLLP GVLGNVGSLD DESHAHGLLE
APMYTKPAAW RDREVPAVLR SGDHGKIARW RRNEALVRTV ARRPDMIAAL APESLDPRDR
AVLEGAGFSA PPGDVAE
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