Gene Sare_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1158 
Symbol 
ID5705749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1308406 
End bp1309527 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content73% 
IMG OID641270676 
Productcystathionine gamma-lyase 
Protein accessionYP_001536057 
Protein GI159036804 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0760832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000519282 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGAGTGACG TGACCGCTGA CCGCGACGGC ACCCGCTGTG TCCGCGCCGG GCTGCCCGAG 
GCCGTGCCCG GGGAGCCGTT CCTACCCGGC CCGGTCTTCG CCGCGCCTTA CCACCTGGAC
CCGTGGGCGG GTCCGGCGGG CGCACCGAAT GGCTACGGCC GGTCGGACAA CCCGACCCGC
CGGTTGCTGG AGGCGGCGAT CGGTGAGCTG GAGGGGGGCG ACTGCCGGGT CCTGTCCAGC
GGGCAGGCGG CGATCACCGG GCTGCTGATG AGTGTGCTGC GCCCCGGCGA CACGGTGGTG
CTTCCCGCCG ACGGCTACTT CTCGGTACGG GCGTTCGCCA CCGAGACCCT GGCCGGCATC
GGGGTACGGG TGCTCTTCGT GCCGACTGTC GGACCGTATC CGGACCTCTC CGGCGTACGC
CTGGTGTTCG TGGAGACGCC GGCCAACCCG GGCCTGGACG TTGTCGACGT GCGTGCATTG
GCCGCCCGCG CGCAGGCGGC CGGGGCCCTG TTGGCGGTGG ACAACACGAC CGCGACTCCG
CTCGGGCAGC GTCCGTTGGA ACTCGGCGCC GACCTGGTGG TGGCCTCCGG TACGAAGGCA
CTCACCGGCC ACTCGGACCT GCTGCTCGGC TACGTCGCCA GCCGGTCGGT CGAGGTGCTG
GCGGCGGTGA CGGGGTGGCG GGATCACACG GGGGCGATAC CGGGCGCGTT CGACGCCTGG
CTGGCACACC GGTCCCTGGC CACGCTCGAC CTGCGGCTTG CCCGACAGAC CGAGAACGCC
TCGGCGCTCG TTCGGATGCT GGCGGGGCAA CCGCGGGTGA CCGGGCTGCG TTGGCCGGGT
AGGCCGGAGG ACCCGGCCTA CCCGGTGGCC GTGGCCCAGA TGCGTCGGAT GCCGGGGGTG
CTCTCGTTCG ATCTCGGCGA CGCCGACCGG GTCGCCCGGT TCGTTGACGC GGCCCGGCTG
GTGGCGGCGG CTACCTCGTT CGGCGGGCTG CACACCACCG CCGACCGGAG GGCACAGTGG
GGCGACGACA CCTCGCCCGG TTTCGTCCGG CTCTCGTGCG GGGTCGAGGA CACCACCGAC
CTGGTCGCCG ACGTGGCGGC CGCGTTGAGG GCCGCTGGTT GA
 
Protein sequence
MSDVTADRDG TRCVRAGLPE AVPGEPFLPG PVFAAPYHLD PWAGPAGAPN GYGRSDNPTR 
RLLEAAIGEL EGGDCRVLSS GQAAITGLLM SVLRPGDTVV LPADGYFSVR AFATETLAGI
GVRVLFVPTV GPYPDLSGVR LVFVETPANP GLDVVDVRAL AARAQAAGAL LAVDNTTATP
LGQRPLELGA DLVVASGTKA LTGHSDLLLG YVASRSVEVL AAVTGWRDHT GAIPGAFDAW
LAHRSLATLD LRLARQTENA SALVRMLAGQ PRVTGLRWPG RPEDPAYPVA VAQMRRMPGV
LSFDLGDADR VARFVDAARL VAAATSFGGL HTTADRRAQW GDDTSPGFVR LSCGVEDTTD
LVADVAAALR AAG